CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCATATGCCAAGGTGGGAGGTGGAGATAGACATTGGCCAGCTAGCCT
AACATACTCATGCCAGAAACAGCAAAAGAAACCCTACCTCAAACACAAGA
TGGAGGGACTACTGCCAGAATTGTCCTGTGAACTCCATTATGTTGTCCAT
GGTTAGCCCCCACACACTCCCCATATATATCCATATATATATAATTGTGT
GTGAGCATATGGATATATATGGGGAGCAATAGGACTACCCTGTTTGCAGG
CACATACTATTCTCCAGTGAAAATTCTGGGAAATCTACCAAACATTCGAA
ATAAATGATTCCATCTTTTTTGTACCCCACCACCCCAGCCTACAAGAATA
AATTATGTATATAAATGTGTGCACGTATAACAAATGCATAGAAACTGTAT
ATTATAGTATCACTTATATGTAGTATTTATGTGCTGAAAATAAAAAGTTC
CTTAGAGTGTCTAAATAAGTGGAGAATAGGTATGTTCACAGATTGGAAGA
CTTTAACATAGCAGAGATGTTAATTTCTCCCAATTCAACTAAATACCTTA
GCACAAGTTTATCTTAGAAATTAAGGGAAAAGTTAAAAGAACTAAAGCAT
TTAAATAAAAGTGGAATGTCCTGGCATGGTGGCAGATGCCTTTAATCTCA
GCACTCTTGAAGCACAGGCAGGCCAGCTTGTTCTATAAAGT

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTTGAGTGTGGGAATGAGTGGATCTCTGAT
TTTCTAAAAAACTTTTCTTGCGATCTTTTTTCCTTCTGTTTGCTTGTCTT
GTCCAAATCTTATTGTTAATTTTTGTTTTATCTTATAATATGTTATTTTA
TTATAAAAACAAAAGTAAATATATATAGTAGTAAGCATTCAGAGACTTTA
AAAACACTTTAAAAACACTAAATTTATATAAAAGTCTCTGTATTCTATAG
TGTTGGAAATTGACAAACTGCTATATTCATACTAAAAGATAAGTCATTAT
ACCTTATGAATATACAAGAGTACGATTACATCCTTAAAATACACTTGTTA
AGAAAATCTATAATTCAAATACGCTTCCTAAATATACTCCCAGAGCTTAG
TAATAACGGACTCCATGCAGATAATTGCATTCCATTTCTGTTTTGAAAGG
TAACTGGAAAGGATGATTAATGCGAGTAGCTACATTAAAATTTAAATGCA
CTAGCATCTTTGTATTCAAACAGAATTTTCTAGCAGTAAATAACAGGATC
ATCTTATTATATGCTTTGGCCTTGATCTGTTCCAGAAGCATGGGCCTCCT
CCTGGCATAATACTTAGTTTTCTATCACCCAAAATCCAAGCCACAAGCCC
GCTGTGTCTCTTAATTTCATCAGAAAAGGTG

Query= MSMg01no174_d11.b1 MSMg01no174_d11.b1 CHROMAT_FILE:
MSMg01no174_d11.b1 PHD_FILE: MSMg01no174_d11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:02 2005
         (320 letters)



>mm_chrX_155709192_155709911
          Length = 720

 Score =  611 bits (316), Expect = e-179
 Identities = 316/316 (100%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcatatgccaaggtgggaggtggagatagacattggccagctagcctaacatactc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatatgccaaggtgggaggtggagatagacattggccagctagcctaacatactc 264

                                                                       
Query: 65  atgccagaaacagcaaaagaaaccctacctcaaacacaagatggagggactactgccaga 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atgccagaaacagcaaaagaaaccctacctcaaacacaagatggagggactactgccaga 324

                                                                       
Query: 125 attgtcctgtgaactccattatgttgtccatggttagcccccacacactccccatatata 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 attgtcctgtgaactccattatgttgtccatggttagcccccacacactccccatatata 384

                                                                       
Query: 185 tccatatatatataattgtgtgtgagcatatggatatatatggggagcaataggactacc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tccatatatatataattgtgtgtgagcatatggatatatatggggagcaataggactacc 444

                                                                       
Query: 245 ctgtttgcaggcacatactattctccagtgaaaattctgggaaatctaccaaacattcga 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctgtttgcaggcacatactattctccagtgaaaattctgggaaatctaccaaacattcga 504

                           
Query: 305 aataaatgattccatc 320
           ||||||||||||||||
Sbjct: 505 aataaatgattccatc 520


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space:   221121
Effective search space used:   221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no174_d11.g1 MSMg01no174_d11.g1 CHROMAT_FILE:
MSMg01no174_d11.g1 PHD_FILE: MSMg01no174_d11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:02 2005
         (652 letters)



>mm_chrX_155884038_155885089
          Length = 1052

 Score = 1214 bits (628), Expect = 0.0
 Identities = 646/652 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttgagtgtgggaatgagtggatctctgattttctaaaaaacttttcttgcgatctttttt 60
           |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 985 ttgactgtgggaatgagtggatctctgattttctaaaaaacttttcttgggatctttttt 926

                                                                       
Query: 61  ccttctgtttgcttgtcttgtccaaatcttattgttaatttttgttttatcttataatat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 925 ccttctgtttgcttgtcttgtccaaatcttattgttaatttttgttttatcttataatat 866

                                                                       
Query: 121 gttattttattataaaaacaaaagtaaatatatatagtagtaagcattcagagactttaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 gttattttattataaaaacaaaagtaaatatatatagtagtaagcattcagagactttaa 806

                                                                       
Query: 181 aaacactttaaaaacactaaatttatataaaagtctctgtattctatagtgttggaaatt 240
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 805 aaacactttaaaaacactaaatttatataaaagtctctgtattttatagtgttggaaatt 746

                                                                       
Query: 241 gacaaactgctatattcatactaaaagataagtcattataccttatgaatatacaagagt 300
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 745 gacaaactgctatattcatactaaaagatgagtcattataccttatgaatatacaagagt 686

                                                                       
Query: 301 acgattacatccttaaaatacacttgttaagaaaatctataattcaaatacgcttcctaa 360
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 685 acgattacatccttaaaatacacttgttaagaaaatctataattcaaatatgcttcctaa 626

                                                                       
Query: 361 atatactcccagagcttagtaataacggactccatgcagataattgcattccatttctgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atatactcccagagcttagtaataacggactccatgcagataattgcattccatttctgt 566

                                                                       
Query: 421 tttgaaaggtaactggaaaggatgattaatgcgagtagctacattaaaatttaaatgcac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tttgaaaggtaactggaaaggatgattaatgcgagtagctacattaaaatttaaatgcac 506

                                                                       
Query: 481 tagcatctttgtattcaaacagaattttctagcagtaaataacaggatcatcttattata 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tagcatctttgtattcaaacagaattttctagcagtaaataacaggatcatcttattata 446

                                                                       
Query: 541 tgctttggccttgatctgttccagaagcatgggcctcctcctggcataatacttagtttt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgctttggccttgatctgttccagaagcatgggcctcctcctggcataatacttagtttt 386

                                                               
Query: 601 ctatcacccaaaatccaagccacaagcccgctgtgtctcttaatttcatcag 652
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 385 ctatcacccaaaatccaagccacaagcccgccgtgtctcttaatttcatcag 334


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space:   668964
Effective search space used:   668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)