NGGATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCAACAACCCATTAAGAATCTAAAAATGGAAATAGGAACAAT
AATGAAGAACAGCCATTTCAATTGATATGTACCCCCAAGATTGCTGAAAC
ACTGGAATACCAAACAGCCAGCATACACCAGCTGATATGAGGCCCCCAAC
ACATATATAGTAGAGAACTTCTGGGTCTGTGTTTATTCAGAGATGATGCA
CCTAACTCTGAAGAGACTGGAGGCCTCAGGGAGTTTAGAGGTCAGGTGGG
GTGGGAGTGGGGTCATTTTTGTTGTATATAGTTTGTCGTGCACCCCTCGC
CCATATTTATTTTTCCTCATCTCGTGACTCATCCGTATTACTCCCCTATT
TTATTCGTTATATTTTGTCCCCCCCCCCAAATTTTTTACCGTCACCCCCA
CCCCCCTCATCTCATTTAAATATACATTATCCCCCACAACTTTTGATTCC
CCCTCATTTTCAATTAATATATTTTACATTACTAAATTCTTTCCTACTTT
TCTCATCTTTTTTTAATTTCTCCCTTCATCCTCTTTCTCTATTTCTGCCT
TCTCCCCCATCTTTTTATATATAATTATCCATTTAATNCTCCCTCCCCCC
CCGCCATCATCTCCTTTATTCTTTCCTCACCCCTATCTCTTTAACTATTT
GTCTCCCCCTTACCCCACCTCATAATATCCTAACAACACAATCACACACT
ATCTCCACTTTATCCACCATCN

NCCCCGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGTTGCTCAGGCTTTTGA
ACATTGTGTGTAAAAGGTTGAAATTCCATCTCAACTTTTAGTTTTTTGCA
TAAAACAAAACATTTTCATATCAAAGTCTTTTGTTAAAGATTTACAGAAA
CAATTAGCAGCCTAAGACAAAGCTTTCAGTCCAATGTAACAAAGAGCAAC
ATAGAAAGTACAAAAACACTCAAACCTCTTAGTATAAAAAACCATAATTT
TAAGGAAAGGCAAGACCATAAATGAAATCACCATCCTTTTTTAAATTTTT
GCTTGATAGGAGATCCACTATTTTGGTTAAAAATGCAAATGTGAATGGAA
ATGTAAGTTATTCCGGGAGCAAATGAGTCTTTTCTATTGAACAGATTGGA
TTCTCCTTCTGTGTGGCTCTGGGAAAACTTCCCTTGAGTCAGAAAGAAAG
GAAATCTGTCTCAAGTTCTGAATATTGTCACTATCAATGAATATTGAAGA
ATTACTGACACCCACAGGGAGCTATATTTATGGAGCCCCATCACCCATTT
TCACAGCTATATGGAAAGGAAGATTATGTATATTCAAAAGCATTCCATGA
ACTTACAGATTTTTCCTTAAGCTTCGCTGCATAATCAAAATTGCCTTGAG
CTCTC

Query= MSMg01no177_i17.g1 MSMg01no177_i17.g1 CHROMAT_FILE:
MSMg01no177_i17.g1 PHD_FILE: MSMg01no177_i17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:08 2005
         (624 letters)



>mm_chrX_56419559_56420582
          Length = 1024

 Score = 1199 bits (620), Expect = 0.0
 Identities = 623/624 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cagttgctcaggcttttgaacattgtgtgtaaaaggttgaaattccatctcaacttttag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagttgctcaggcttttgaacattgtgtgtaaaaggttgaaattccatctcaacttttag 260

                                                                       
Query: 61  ttttttgcataaaacaaaacattttcatatcaaagtcttttgttaaagatttacagaaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttttgcataaaacaaaacattttcatatcaaagtcttttgttaaagatttacagaaac 320

                                                                       
Query: 121 aattagcagcctaagacaaagctttcagtccaatgtaacaaagagcaacatagaaagtac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aattagcagcctaagacaaagctttcagtccaatgtaacaaagagcaacatagaaagtac 380

                                                                       
Query: 181 aaaaacactcaaacctcttagtataaaaaaccataattttaaggaaaggcaagaccataa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaaacactcaaacctcttagtataaaaaaccataattttaaggaaaggcaagaccataa 440

                                                                       
Query: 241 atgaaatcaccatccttttttaaatttttgcttgataggagatccactattttggttaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgaaatcaccatccttttttaaatttttgcttgataggagatccactattttggttaaa 500

                                                                       
Query: 301 aatgcaaatgtgaatggaaatgtaagttattccgggagcaaatgagtcttttctattgaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatgcaaatgtgaatggaaatgtaagttattccgggagcaaatgagtcttttctattgaa 560

                                                                       
Query: 361 cagattggattctccttctgtgtggctctgggaaaacttcccttgagtcagaaagaaagg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagattggattctccttctgtgtggctctgggaaaacttcccttgagtcagaaagaaagg 620

                                                                       
Query: 421 aaatctgtctcaagttctgaatattgtcactatcaatgaatattgaagaattactgacac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaatctgtctcaagttctgaatattgtcactatcaatgaatattgaagaattactgacac 680

                                                                       
Query: 481 ccacagggagctatatttatggagccccatcacccattttcacagctatatggaaaggaa 540
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 681 ccacagggagctatatttatggagccccatcacccattttcacggctatatggaaaggaa 740

                                                                       
Query: 541 gattatgtatattcaaaagcattccatgaacttacagatttttccttaagcttcgctgca 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gattatgtatattcaaaagcattccatgaacttacagatttttccttaagcttcgctgca 800

                                   
Query: 601 taatcaaaattgccttgagctctc 624
           ||||||||||||||||||||||||
Sbjct: 801 taatcaaaattgccttgagctctc 824


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space:   622596
Effective search space used:   622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)