TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAGTGCTATTCACCAAAGTGGTGGGGATGACAGGAAGGGGATAGAG
ATAGATGGTGTGAAATATCACTGATGTTCATAGAAGAAAACCAGAATATA
CCCTAAAGATGAAGGGAGACCCATGGAAGTAGTTGCTGGCACTGCTAACT
GCAGAAGTATACAATACTTCCTTGGATCATAAGGATTTTCTTCTGATGCT
CAGTGGCAGCAATTTTAATGTACTTATTTTACTTAATTTAACCAATTTAA
TTAATTTATACCCTATCTTCTTCCCTTTACAACCCTCATTCATCAATTCA
TTTATTGAAAGACATTTGTGATGTGCCAGAAGTTATACTAGGCGATAGGG
TTACAAAGGTGAACACACCCCCCAAACTTGGAGGTTTGCTTTTTTCCTAG
TTCCAAATATTTGGAGCTCAGCATACTGTGAAGTTGGAGTCAGAATTAAA
TGCTAACCCACCAAGCTTCTTTCATTGCTACTTTAATGTGTCTTCATGCC
TCCCTTCTTTCTCATGCAAATGTTTGCTTGAACATTTAATACTCTCTAGA
TGTGCCTGCGGGGGCACAGCCTCTCAGTGCAGGATTCTGGGCAGCCATTA
GCAAAAGGTCAGACCCCTCAACCCTATTCTTTTCTCCTCAGGGGTCTATC
CAAAGCTCAGCATCTTGCCTCATCCTCACAGCAGGCACGGGAATCAN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXACCACTGAAGTCAGTACCCCTCAA
TAGATTATAAGGATTCCAAAATGTGTTAATGTGAAATAAGATGAAATATA
TAGGATTTTAACTGATTAAAATCTTTTAAATTCTTAGATAAAGAAGGCCT
TTTGGTAAAAGCTGCCCAAGATCAAGGCAGTCAAACTTTCAGCATGGGCA
GAGGAGGGACTCCACCTGTCCTATGCCTACTTGAGAAGTTTCTGGCAATT
GATGGCTGCTTGGGAAGGGGTAGTCAGTTTTCTTCAAGGATTTAGCTCCT
GAGAGGCTACCTAGGTTCCAATAGAGAGCCCTACACATATGCACATACAG
GCAAGTAGTAAATAGACTCACCGATTTTTTTTAAGAATATAAAGTTGGGA
GAAAAAAGTACGTAGGGGAAGAAGAGAGGAATTATAGGGGAGTTCCTCTT
TATTGCATTCCTCCGTATCGCATACTATTGTTGACCCCCCACCTCCTGTT
TGCCTCATGCTTATCTTCGCACGTCAATATGCGGATTCCTTCATAAAGTA
ATATAAGTTCCCTGATATTACCTTACTTTCATATACAAATAGCGACATTC
ACGTCGGTTGTTTAATTATATCCATCTTTATGGATTATAATCGATATAGA
TTTCGCGCGTTCACCACTATTTATTCTTTACTTTGCATACACTACGCCTC
CCC

Query= MSMg01no178_f05.b1 MSMg01no178_f05.b1 CHROMAT_FILE:
MSMg01no178_f05.b1 PHD_FILE: MSMg01no178_f05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:51:06 2005
         (579 letters)



>mm_chrX_156320645_156321623
          Length = 979

 Score = 1044 bits (540), Expect = 0.0
 Identities = 567/576 (98%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcagtgctattcaccaaagtggtggggatgacaggaaggggatagagatagatgg 63
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagtgctattgaccaaagtggtggggatgacaggaaggggatagagatagatgg 263

                                                                       
Query: 64  tgtgaaatatcactgatgttcatagaagaaaaccagaatataccctaaagatgaagggag 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgtgaaatatcactgatgttcatagaagaaaaccagaatataccctaaagatgaagggag 323

                                                                       
Query: 124 acccatggaagtagttgctggcactgctaactgcagaagtatacaatacttccttggatc 183
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acccatggaggtagttgctggcactgctaactgcagaagtatacaatacttccttggatc 383

                                                                       
Query: 184 ataaggattttcttctgatgctcagtggcagcaattttaatgtacttattttacttaatt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ataaggattttcttctgatgctcagtggcagcaattttaatgtacttattttacttaatt 443

                                                                       
Query: 244 taaccaatttaattaatttataccctatcttcttccctttacaaccctcattcatcaatt 303
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 444 taaccaatttaattaatttataccctatcttcttccctttacaactctcattcatcaatt 503

                                                                       
Query: 304 catttattgaaagacatttgtgatgtgccagaagttatactaggcgatagggttacaaag 363
           |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 504 catttactgaaagacatttgtgatgtgccagaagttatactaggtgatagggttacaaag 563

                                                                       
Query: 364 gtgaacacaccccccaaacttggaggtttgcttttttcctagttccaaatatttggagct 423
           ||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gtgaacacacgttccaaacttggaggtttgcttttttcctagttccaaatatttggagct 623

                                                                       
Query: 424 cagcatactgtgaagttggagtcagaattaaatgctaacccaccaagcttctttcattgc 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cagcatactgtgaagttggagtcagaattaaatgctaacccaccaagcttctttcattgc 683

                                                                       
Query: 484 tactttaatgtgtcttcatgcctcccttctttctcatgcaaatgtttgcttgaacattta 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tactttaatgtgtcttcatgcctcccttctttctcatgcaaatgtttgcttgaacattta 743

                                               
Query: 544 atactctctagatgtgcctgcgggggcacagcctct 579
           ||||||||||||||||||||||||| ||||||||||
Sbjct: 744 atactctctagatgtgcctgcggggccacagcctct 779


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space:   551361
Effective search space used:   551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no178_f05.g1 MSMg01no178_f05.g1 CHROMAT_FILE:
MSMg01no178_f05.g1 PHD_FILE: MSMg01no178_f05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:51:06 2005
         (417 letters)



>mm_chrX_156435137_156435953
          Length = 817

 Score =  600 bits (310), Expect = e-176
 Identities = 325/330 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   accactgaagtcagtacccctcaatagattataaggattccaaaatgtgttaatgtgaaa 60
           |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 330 accattgaagtcagtacccctcaatagattataacgattccaaaatgtgttaatgtgaaa 271

                                                                       
Query: 61  taagatgaaatatataggattttaactgattaaaatcttttaaattcttagataaagaag 120
           ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 270 taagatgaaatatataggattttaactgattaaaatcctttaaattcttacataaagaag 211

                                                                       
Query: 121 gccttttggtaaaagctgcccaagatcaaggcagtcaaactttcagcatgggcagaggag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gccttttggtaaaagctgcccaagatcaaggcagtcaaactttcagcatgggcagaggag 151

                                                                       
Query: 181 ggactccacctgtcctatgcctacttgagaagtttctggcaattgatggctgcttgggaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 ggactccacctgtcctatgcctacttgagaagtttctggcaattgatggctgcttgggaa 91

                                                                       
Query: 241 ggggtagtcagttttcttcaaggatttagctcctgagaggctacctaggttccaatagag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 90  ggggtagtcagttttcttcaaggatttagctcctgagaggctacctaggctccaatagag 31

                                         
Query: 301 agccctacacatatgcacatacaggcaagt 330
           ||||||||||||||||||||||||||||||
Sbjct: 30  agccctacacatatgcacatacaggcaagt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 817
Length adjustment: 9
Effective length of query: 408
Effective length of database: 808
Effective search space:   329664
Effective search space used:   329664
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)