MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-178N13
Chromosome	X (Build37)
Map Location	52,582,917 - 52,583,072
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC625476, LOC625508, LOC666096, LOC100040867, LOC100040894, LOC666122, LOC666135, LOC100038960, EG666151, EG666161, EG666199, 4930527E24Rik, LOC626274
Downstream gene	LOC625210, LOC100039055, LOC100039066, LOC676623, EG626315, LOC666268, LOC666097, LOC666107, LOC626348, LOC100039146, LOC100039160, EG630825, LOC100039187, LOC673263, 3830403N18Rik, LOC626439, Gm773, LOC100039254, LOC100039266, LOC100039276, 1600025M17Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC625476 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625476
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC625508 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625508
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	LOC666096 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666096
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	LOC100040867 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040867
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	LOC100040894 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040894
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	LOC666122 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666122
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	LOC666135 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666135
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	LOC100038960 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038960
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	EG666151 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666151 MGI:3645943
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	EG666161 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666161 MGI:3643207
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	EG666199 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666199 MGI:3644332
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	4930527E24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75140 MGI:1922390
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 5 ESTs, 1 Protein

name	LOC626274 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626274
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins pseudo : _no_value

name	LOC625210 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625210
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins pseudo : _no_value

name	LOC100039055 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039055
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins pseudo : _no_value

name	LOC100039066 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039066
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs

name	LOC676623 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:676623
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	EG626315 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:626315 MGI:3646403
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 5 ESTs, 1 Protein

name	LOC666268 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666268
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC666097 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666097
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC666107 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666107
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC626348 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626348
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100039146 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039146
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100039160 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039160
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	EG630825 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:630825 MGI:3644064
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC100039187 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039187
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC673263 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:673263
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	3830403N18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70691 MGI:1917941
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC626439 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626439
definition	note : splicing factor, arginine/serine-rich 10-like pseudo : _no_value

name	Gm773 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:331416 MGI:2685619
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039254 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039254
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100039266 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039266
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100039276 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039276
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	1600025M17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72030 MGI:1919280
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 2 Proteins

name	LOC625508 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:83001215 GeneID:625508
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : similar to Xlr-related, meiosis regulated transcript_id : XM_890086.1

name	LOC666096 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94407432 GeneID:666096
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : similar to Xlr-related, meiosis regulated transcript_id : XM_981599.1

name	LOC100040867 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271614 GeneID:100040867
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : similar to Xlr-related, meiosis regulated transcript_id : XM_001475416.1

name	LOC100040894 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271616 GeneID:100040894
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : similar to Xlr-related, meiosis regulated transcript_id : XM_001475448.1

name	LOC666122 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94407437 GeneID:666122
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : similar to Xlr-related, meiosis regulated transcript_id : XM_981768.1

name	LOC666135 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94407439 GeneID:666135
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : similar to Xlr-related, meiosis regulated transcript_id : XM_981842.1

name	EG666151 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94407443 GeneID:666151 MGI:3645943
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : predicted gene, EG666151 transcript_id : XM_981963.1

name	EG666161 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94407445 GeneID:666161 MGI:3643207
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : predicted gene, EG666161 transcript_id : XM_982040.1

name	4930527E24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271621 GeneID:75140 MGI:1922390
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 4 ESTs, 1 Protein product : RIKEN cDNA 4930527E24 gene, transcript variant 3 transcript_id : XM_976915.2

name	4930527E24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271619 GeneID:75140 MGI:1922390
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : RIKEN cDNA 4930527E24 gene transcript_id : XM_001471966.1

name	LOC100039066 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271626 GeneID:100039066
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : hypothetical protein LOC100039066 transcript_id : XM_001472118.1

name	EG626315 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94407450 GeneID:626315 MGI:3646403
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 4 ESTs, 1 Protein product : predicted gene, EG626315, transcript variant 2 transcript_id : XM_890908.2

name	EG626315 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271628 GeneID:626315 MGI:3646403
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : predicted gene, EG626315, transcript variant 1 transcript_id : XM_001472153.1

name	EG630825 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271630 GeneID:630825 MGI:3644064
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : predicted gene, EG630825 transcript_id : XM_001472389.1

name	3830403N18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803393 GeneID:70691 MGI:1917941
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 3830403N18 gene transcript_id : NM_027510.2

name	Gm773 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142344171 GeneID:331416 MGI:2685619
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 773, (NCBI) transcript_id : NM_001033423.2

name	LOC100039276 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271632 GeneID:100039276
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to ZFP206 transcript_id : XM_001472597.1

name	1600025M17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94407458 GeneID:72030 MGI:1919280
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 2 Proteins product : RIKEN cDNA 1600025M17 gene transcript_id : XM_983040.1

name	LOC625508 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:83001216 GeneID:625508
definition	codon_start : 1 product : hypothetical protein protein_id : XP_895179.1

name	LOC666096 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94407433 GeneID:666096
definition	codon_start : 1 product : hypothetical protein protein_id : XP_986693.1

name	LOC100040867 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271615 GeneID:100040867
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475466.1

name	LOC100040894 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271617 GeneID:100040894
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475498.1

name	LOC666122 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94407438 GeneID:666122
definition	codon_start : 1 product : hypothetical protein protein_id : XP_986862.1

name	LOC666135 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94407440 GeneID:666135
definition	codon_start : 1 product : hypothetical protein protein_id : XP_986936.1

name	EG666151 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94407444 GeneID:666151 MGI:3645943
definition	codon_start : 1 product : hypothetical protein protein_id : XP_987057.1

name	EG666161 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94407446 GeneID:666161 MGI:3643207
definition	codon_start : 1 product : hypothetical protein protein_id : XP_987134.1

name	4930527E24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271620 GeneID:75140 MGI:1922390
definition	codon_start : 1 product : hypothetical protein LOC75140 protein_id : XP_001472016.1

name	4930527E24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271622 GeneID:75140 MGI:1922390
definition	codon_start : 1 product : hypothetical protein LOC75140 isoform 3 protein_id : XP_982009.2

name	LOC100039066 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271627 GeneID:100039066
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472168.1

name	EG626315 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271629 GeneID:626315 MGI:3646403
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001472203.1

name	EG626315 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83001271 GeneID:626315 MGI:3646403
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_896001.1

name	EG630825 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271631 GeneID:630825 MGI:3644064
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472439.1

name	3830403N18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21746153 CCDS:CCDS30141.1 GeneID:70691 MGI:1917941
definition	codon_start : 1 product : Xlr-like protein_id : NP_081786.1

name	Gm773 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677458 CCDS:CCDS30142.1 GeneID:331416 MGI:2685619
definition	codon_start : 1 product : hypothetical protein LOC331416 protein_id : NP_001028595.1

name	LOC100039276 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271633 GeneID:100039276
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472647.1

name	1600025M17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94407459 GeneID:72030 MGI:1919280
definition	codon_start : 1 product : hypothetical protein LOC72030 protein_id : XP_988134.1

name	LOC625476 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625476
definition	number : 2 pseudo : _no_value

name	LOC625476 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625476
definition	number : 3 pseudo : _no_value

name	LOC625476 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625476
definition	number : 4 pseudo : _no_value

name	LOC625476 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625476
definition	number : 5 pseudo : _no_value

name	LOC100038960 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100038960
definition	number : 1 pseudo : _no_value

name	LOC100038960 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100038960
definition	number : 2 pseudo : _no_value

name	LOC100038960 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100038960
definition	number : 3 pseudo : _no_value

name	LOC100038960 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100038960
definition	number : 4 pseudo : _no_value

name	LOC100038960 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100038960
definition	number : 5 pseudo : _no_value

name	EG666199 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666199
definition	number : 1 pseudo : _no_value

name	EG666199 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666199
definition	number : 2 pseudo : _no_value

name	EG666199 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666199
definition	number : 3 pseudo : _no_value

name	EG666199 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666199
definition	number : 4 pseudo : _no_value

name	EG666199 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666199
definition	number : 5 pseudo : _no_value

name	EG666199 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666199
definition	number : 6 pseudo : _no_value

name	LOC676623 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676623
definition	number : 1 pseudo : _no_value

name	LOC676623 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676623
definition	number : 2 pseudo : _no_value

name	LOC676623 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676623
definition	number : 3 pseudo : _no_value

name	LOC676623 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676623
definition	number : 4 pseudo : _no_value

name	LOC676623 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676623
definition	number : 5 pseudo : _no_value

name	LOC676623 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676623
definition	number : 6 pseudo : _no_value

name	LOC676623 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676623
definition	number : 7 pseudo : _no_value

name	LOC676623 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676623
definition	number : 8 pseudo : _no_value

name	LOC676623 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676623
definition	number : 9 pseudo : _no_value

name	LOC666268 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666268
definition	number : 1 pseudo : _no_value

name	LOC666268 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666268
definition	number : 2 pseudo : _no_value

name	LOC666268 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666268
definition	number : 3 pseudo : _no_value

name	LOC666097 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666097
definition	number : 1 pseudo : _no_value

name	LOC666107 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666107
definition	number : 1 pseudo : _no_value

name	LOC666107 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666107
definition	number : 2 pseudo : _no_value

name	LOC666107 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666107
definition	number : 3 pseudo : _no_value

name	LOC666107 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666107
definition	number : 4 pseudo : _no_value

name	LOC666107 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666107
definition	number : 5 pseudo : _no_value

name	LOC666107 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666107
definition	number : 6 pseudo : _no_value

name	LOC666107 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666107
definition	number : 7 pseudo : _no_value

name	LOC626348 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626348
definition	number : 1 pseudo : _no_value

name	LOC666107 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666107
definition	number : 8 pseudo : _no_value

name	LOC666268 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666268
definition	number : 4 pseudo : _no_value

name	LOC666268 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666268
definition	number : 5 pseudo : _no_value

name	LOC666268 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666268
definition	number : 6 pseudo : _no_value

name	LOC100039146 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039146
definition	number : 6 pseudo : _no_value

name	LOC100039146 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039146
definition	number : 5 pseudo : _no_value

name	LOC100039146 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039146
definition	number : 4 pseudo : _no_value

name	LOC100039146 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039146
definition	number : 3 pseudo : _no_value

name	LOC100039146 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039146
definition	number : 2 pseudo : _no_value

name	LOC100039146 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039146
definition	number : 1 pseudo : _no_value

name	LOC100039160 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039160
definition	number : 1 pseudo : _no_value

name	LOC100039187 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039187
definition	number : 1 pseudo : _no_value

name	LOC673263 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:673263
definition	number : 2 pseudo : _no_value

name	LOC673263 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:673263
definition	number : 1 pseudo : _no_value

name	LOC100039254 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039254
definition	number : 1 pseudo : _no_value

name	LOC100039254 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039254
definition	number : 2 pseudo : _no_value

name	LOC100039266 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039266
definition	number : 1 pseudo : _no_value

name	LOC626274 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271623 GeneID:626274
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : similar to Xlr-like pseudo : _no_value transcript_id : XR_030541.1

name	LOC625210 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271624 GeneID:625210
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : similar to Xlr-like pseudo : _no_value transcript_id : XR_035648.1

name	LOC100039055 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271625 GeneID:100039055
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : similar to Xlr-like pseudo : _no_value transcript_id : XR_030561.1

clone name	MSMg01-178N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093G03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-313E05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-180H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186O23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-349D08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-122L09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-373K09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-544M05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-124N06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-147I11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-104G12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-532H12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-485H05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-120E12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-424N13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-466I05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-207N11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-545B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291N03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-187K01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-513G07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-462B12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-293F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525L10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-366F12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-501C17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-333C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173D17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-176I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503J05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-157B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544D15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-061K10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-451E03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-525H02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-271I22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-292H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343A13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-429H15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-313A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141M17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-178H23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-147N13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-166A12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-171N03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-411I19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-430O09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-482J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153F20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-318K04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-374P19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-510I07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-065E16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-308H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471P21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-117E18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-477M21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-403O05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-099K21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-322O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236H21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-328E10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-415P23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-346P03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-534K03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-067I19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-093P16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-137B15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-158E17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-350D15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-361J14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-419E22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-422B09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-074I06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-067P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294J15
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-178N13.T7 (MSMg01no178_n13.b1)	MSMg01-178N13.TJ (MSMg01no178_n13.g1)
ACC	AG372813	AG372814
length	733	732
length of high quality (start - end)	366 (46 - 411)	250 (77 - 326)
definition	CHROMAT_FILE: MSMg01no178_n13.b1 PHD_FILE: MSMg01no178_n13.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:51:43 2005	CHROMAT_FILE: MSMg01no178_n13.g1 PHD_FILE: MSMg01no178_n13.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:51:43 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG AATTCTTTCTTTACCTCTGAGGCCCGTTTTTTATTTGATTTTCTGGAGTC CACCTTCTTGAGTTCTTTATATATATTTGATATTAGTGCCCTATCTGATT TAGGATAGTGAAAGATCCTTTCACAATCTTTTGGTGACTTTTTTGTCTTA TTGAAGGTGTCTTTTGCCTTACAAAAGATTTGCAGCTTTATGAGGTCCCA TTTGTCAATTCTAAATCTTACAATACAAGCCATTTTTCTTCTATTCAGGA ATTTTTCCCCTGTTCCCATATCTTTGAGGCTTTTCCCCACTTTCTCCTCT ACAAGTTTCAGTGTCTCTGATTTTATGTGGAGCTCCTTGATCCACTTCTA TTTGACCTTAGTACCCCGAGATAGGAATGGATAGATTCACATTCTTCTAC ATGATAACCACCAATTGTGCCAGCACTATTTGTTTAAAATGCAGTCTTTT TTACACTGGATGGTTTTAGCTCCCTTGCAGATGATCTATTGACAATAGGC GTGTGGATTCACTTCTGTATCTTCAATTCTATTCCATTGGGCTACTTCTC TGTCCTTATATTCTTACCATGCCCGTTTTTATCCCTATTGCTCTGTACTT TAAGCCTCCATTCTCGCCTGTTGCTTTTTCTTTTATTTCTCTTTTATCTC GGCTGAAGTTTCTTTTGCTATATTTTTTATTTN	CCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXAACTGTGTTGCATTCTCTTTACCA GGAAGAGGTAGGCGAAACATCACCCCAGCAATTGTGTTCCTCTTTTCTTG CCTTTGGGAGGGCCTCAGCAAACCTAGAGCTTTCTGAGCTTCCTAAAACT TGGAAGTTTTATTTGCTTCTGAGTTGTAGGATCTTCCATCCTCCTTATAG GAAAAATGTATGAGAATTTTGCTTCCTATAAAAACCCAGTAATGTTATAT GTGTAGTTTTTTTTTATTTTGTTTTGNTTTANTCTCNTGTGTGTCCNCNN NTGTTTATTTTTTTTGCCCCCCCCCCCCCCCATTTTTGAGAGTGTATAAA ATAATGAGTTCCTGCCCCCCCCAATAAAAGAAACTGTCTCTGGGGGGGGG GTTTTTGCTACCGCAGGATTAAATGTAACATGCTTTTGCCAATGTATCTG GTTTGTGGATATAAATTTTGACGTATGTTATATAAGTGTTTTTATTTTTA GTCAAAATAACAAAACTCTGACCCATTCGGTGAGATTTAGCAACTATCAA GTAGTAAGTTGTATGATGCTTAATGTTTTTTTTGCGTGAGGTGAAATAGC GATTTTCATTTATATCAATTTTGTTTTAGTGTCTTTCGCCCTATAACTAC TATGTATCTCACCCCTCTGTGTATTGTTTCTN
quality values	Open. Hide. 8 8 8 8 8 9 17 37 39 37 29 28 28 22 22 32 37 33 33 33 37 37 44 48 48 30 28 28 25 23 19 17 8 8 6 6 8 13 24 30 29 29 28 29 29 31 41 57 57 38 36 36 36 36 33 59 59 59 59 41 34 32 25 22 22 34 34 39 39 42 42 50 50 59 59 59 59 59 59 57 57 53 53 53 53 53 53 53 53 53 53 57 57 68 68 68 68 68 51 51 51 51 51 51 68 68 68 68 68 68 68 68 68 68 68 59 57 57 54 54 54 54 54 57 57 68 68 51 51 51 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 48 48 48 48 48 48 57 68 68 68 48 48 46 46 46 48 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 57 57 68 68 68 68 68 68 68 68 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 59 50 43 43 43 44 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 68 68 68 68 68 68 68 59 59 48 59 57 59 59 59 59 68 68 68 68 68 59 59 54 54 54 59 59 59 59 59 57 50 53 48 48 48 48 48 57 57 53 53 57 50 50 50 50 50 50 47 47 40 30 22 12 9 9 20 14 11 10 10 10 10 12 24 30 59 47 50 50 50 50 50 57 59 59 59 59 57 57 48 48 48 57 59 59 59 59 57 57 57 57 57 57 54 59 48 46 41 41 41 47 47 47 47 43 43 43 47 43 48 48 57 59 59 59 57 57 57 54 54 54 57 59 54 44 44 36 32 28 40 40 57 54 57 57 57 57 68 43 43 48 48 48 43 43 43 43 36 43 39 37 37 34 34 23 23 23 34 34 40 30 30 19 24 28 34 17 15 8 8 8 10 13 30 30 28 25 12 12 12 15 28 30 43 37 33 33 32 21 19 13 13 14 29 30 21 17 10 9 9 10 17 11 12 10 12 11 18 12 11 9 9 14 15 12 11 17 17 12 13 8 8 8 8 8 9 9 15 14 22 21 12 11 11 13 12 8 8 8 8 8 8 10 8 11 8 9 10 8 19 11 11 12 11 11 12 12 8 8 6 6 8 10 8 10 10 10 10 10 11 10 10 10 11 8 8 8 8 8 11 10 10 10 11 13 11 10 8 6 7 10 7 8 8 8 8 8 8 8 8 6 10 10 10 6 6 8 8 8 12 8 8 10 10 10 10 13 14 14 12 12 14 14 16 13 8 8 8 8 8 8 8 9 13 13 12 8 6 6 8 8 12 10 10 13 11 10 10 12 13 15 9 9 8 8 8 6 10 8 12 10 8 8 8 8 10 19 12 11 6 6 6 8 3 0	Open. Hide. 6 6 6 6 10 11 11 10 11 23 18 35 32 37 41 41 41 50 37 41 50 53 53 53 41 41 37 37 47 41 39 37 28 24 24 28 28 34 25 26 25 25 28 30 47 53 53 53 53 53 50 50 50 53 53 53 53 48 44 43 43 29 34 36 36 36 42 59 68 68 42 42 42 42 50 50 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 47 42 42 40 40 42 57 57 57 57 57 57 57 57 53 59 59 59 47 37 37 37 25 25 12 13 13 28 28 39 41 42 50 50 50 50 53 50 57 57 57 57 59 59 59 59 59 59 57 57 53 53 53 53 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 57 57 53 50 50 50 41 41 41 39 39 23 23 3 0 3 23 23 3 0 3 25 23 3 0 3 23 23 43 47 43 23 27 3 0 3 0 0 0 3 10 9 9 9 7 7 8 8 13 21 31 22 23 13 10 9 9 9 8 8 11 8 8 8 12 9 10 9 11 9 11 20 27 27 12 12 11 12 12 15 13 14 14 27 15 19 11 8 8 8 8 8 9 11 11 11 16 12 13 12 17 10 12 9 9 11 17 10 10 8 8 8 8 10 16 20 9 9 9 15 9 9 9 8 8 8 8 8 8 8 10 10 11 24 18 10 9 8 8 10 10 10 9 15 11 11 11 15 13 8 8 8 8 8 8 10 15 12 10 11 10 10 8 8 8 8 8 12 10 10 13 10 10 10 10 10 10 10 8 10 10 8 8 8 8 8 6 6 8 8 8 10 10 9 8 8 8 8 8 10 9 9 10 15 10 10 10 8 8 8 7 6 8 8 8 8 9 9 9 10 10 8 8 8 8 8 8 10 10 10 11 11 11 13 13 13 10 10 10 10 10 9 8 8 10 8 8 8 8 8 8 10 10 12 10 9 9 9 9 8 8 6 6 6 6 6 6 8 8 8 8 8 9 9 10 10 8 8 8 8 8 8 8 8 8 8 10 10 10 10 10 10 10 9 9 11 8 8 6 6 8 8 8 11 15 16 10 10 9 9 10 8 8 8 9 10 8 10 8 8 8 8 8 7 7 8 8 8 8 8 8 8 8 9 8 8 8 8 8 8 10 10 10 8 8 8 12 14 14 10 8 8 10 9 9 9 11 10 10 10 10 10 10 12 6 6 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 6 6 8 8 6 6 8 8 8 9 11 18 13 19 19 16 13 8 8 8 8 8 8 8 8 8 8 8 3 0

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no178_n13.g1 MSMg01no178_n13.g1 CHROMAT_FILE:
MSMg01no178_n13.g1 PHD_FILE: MSMg01no178_n13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:51:43 2005
         (250 letters)



>mm_chrX_52582674_52583324
          Length = 651

 Score =  153 bits (79), Expect = 1e-41
 Identities = 139/159 (87%), Gaps = 7/159 (4%)
 Strand = Plus / Minus

                                                                       
Query: 44  tcaccccagcaattgtgttcctcttttcttgcctttgggagggcctcagcaaacc-taga 102
           |||||||||||||| | ||  ||||| |  |||||||||| |||| ||| ||||| || |
Sbjct: 399 tcaccccagcaattcttttaatctttcccagcctttgggatggcc-caggaaaccttaca 341

                                                                       
Query: 103 gctttctgagcttcctaaaacttggaagttttattt-gcttctgagttgtaggatcttcc 161
           |||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||
Sbjct: 340 gctttctgagcttcctaaaacttgcaagttttatttag-ttctgagttgtaggatcttcc 282

                                                  
Query: 162 atcctccttataggaa-aaatgtatgag-aattttgctt 198
           ||||||||||||||||  ||||| |||| || |||||||
Sbjct: 281 atcctccttataggaaggaatgtgtgagtaa-tttgctt 244


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 2
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 651
Length adjustment: 9
Effective length of query: 241
Effective length of database: 642
Effective search space:   154722
Effective search space used:   154722
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information