TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCTACACATGTAACAGCTACTGTGTACACAGAAACTGGCTCACACA
CATGGATATATGGACCTGCAAATGCACATGTCTACACACCCACACACACC
AAATTGTCAGGAAAAAAAGCAAAAGAAAATTTCTCATTTTACACAGTGAG
TATTTGAGTACTACAGTAAATGAAATTGGTGGATGCTCACAGCTATTGGA
TGGATCACAGGGCCCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCT
AAAGGGAACTGCAACCCTATAGGTTGAACAACAATATGAACTAACCAGTA
CCCCGGAGCTCTTGTCTCTAGCTGCCCCCCCCCAAAAGATGGCCTAGTCA
GCCATCACTGTAAAGACACCCCCATTGGACTCTCAAACTTTATATGCCCC
AGTACAGGGAAACACCAGGGCCAAAAACTGGGAATGGTTGGGTAGGGGAG
TTTACAATTCTTTTCATTTTATTTATTTTTCACACCCCACCTCCCCATTC
TAAATCTTATTTTCCCACCCCCTCTAATAACAAAACATCTCTCCCCCTCC
CCTCTTTCTCCTTTTATTAAACAATTTATAAACTCATCACTAATACGACT
CTTACCCACACAAAAAATCCCCCCCAAATGTATTTCATATTTATACCTCT
CTCACCTTATTTTTTTTCCCTCCCCTCCCTTTCTTTCCCCATTTTTTCCT
N

TTCCTTCCCCTTTTCTCTTTGCCCCCCCCCCCCCTTCCCCCTTCCCTCTT
TTTCTCCCTTCCCCCCCCCTTCCTTCTCCCCCCTCCCCCCCTTCCCTTCC
CTTTCCCCCCTTTTCTCCCCCCCCTCTTTTTTTTTTCTCCCTTCCCCCTC
CTCCCCTTTCCTTCCCCTCCTTTTCCTTCTCTTCCCCTTCCCCCCTCCCT
TCTCCTCCTCCTCCCTTTTTCCCTTCCCCCCCTCCTCCCCTTCCCCCCCC
TTCTTTCTTTTTTCCGTNNCTTNNCNNNNNTCGCTTGCTGTGGGTGGCCT
GTCGGCCGNCTGGNCGTCGTTCNTTGGGGTTGNCCNTTCTGTGGGTTTTT
CGGGGCNTTTTCTTTGGTTTTTCCGNNGGGGGTTNNTTTGTTTTTCGGTT
TTCTTTGGGGCCCCCTTTNTTTTTTCGGGGCCCTTTTTTCGGGGCTTTTT
CTTGGGGGCTCCGTGGTTTTGCCCT

Query= MSMg01no182_p15.b1 MSMg01no182_p15.b1 CHROMAT_FILE:
MSMg01no182_p15.b1 PHD_FILE: MSMg01no182_p15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:52 2005
         (322 letters)



>mm_chrX_73411539_73412260
          Length = 722

 Score =  596 bits (308), Expect = e-175
 Identities = 317/322 (98%), Gaps = 4/322 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcctacacatgtaacagctactgtgtacacagaaactggctcacacacatggatat 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctacacatgtaacagctactgtgtacacagaaactggctcacacacatggatat 264

                                                                       
Query: 65  atggacctgcaaatgcacatgtctacacacccacacacaccaaattgtcaggaaaaaaag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atggacctgcaaatgcacatgtctacacacccacacacaccaaattgtcaggaaaaaaag 324

                                                                       
Query: 125 caaaagaaaatttctcattttacacagtgagtatttgagtactacagtaaatgaaattgg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 caaaagaaaatttctcattttacacagtgagtatttgagtactacagtaaatgaaattgg 384

                                                                       
Query: 185 tggatgctcacag----ctattggatggatcacagggcccccaatggaggagctagagaa 240
           |||||||||||||    |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tggatgctcacagtcagctattggatggatcacagggcccccaatggaggagctagagaa 444

                                                                       
Query: 241 agtacccaaggagctaaagggaactgcaaccctataggttgaacaacaatatgaactaac 300
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 445 agtacccaaggagctaaagggaactgcaactctataggttgaacaacaatatgaactaac 504

                                 
Query: 301 cagtaccccggagctcttgtct 322
           ||||||||||||||||||||||
Sbjct: 505 cagtaccccggagctcttgtct 526


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space:   223169
Effective search space used:   223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)