ATTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTCAACTGACCAATATCGAATGGTTGAGAAGCACCTAAAAATGTT
CAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTC
TACCTCACACCAGTCAGAATGAATGGCTAAGACCAAAACCTCAGGTGACA
GTAGATGTTGGTGAAGATGTGGAGAAAGAGGAACACTCCTCCATTGCTGG
TGGGATTGCAAACTGGTACAACCACTCTGGAAATCAGTCTGTTGGGTTTC
TCAGATAACTGGACTTCGTACTATCTGGGGACCCAGCAATACCATTCCCA
GGATGCTCCGACATGTTATAAGGACACATGCTCCACTATTGCCACATGCA
CTCCAGTAGTGACTCACATGACAGGTCCAAAAGCTTGGACACATTCCTGA
GGGGAAAAGTTCACAGAAACTTAGTGTCCTGGATCTGTGACATCCTGTAA
AACGAATACTCCAAATCTGTCCTTGCTTTAGTCAGTGAATGTATCTGTGT
TTTCCTTCAATATTGTTTTATTATAAGTGTGTCTATGGATTGATTTTGAC
ATATACTTAAGTTATATTATCCTCTACCAGTGTTCCAGTGTCCTAGGCTG
TCTGTGAGCCCACCCTGGGCTTGGAATTCAGTAGGAATGTTTCCTATTTC
AGTATCATTCACAATGACCTCTAGT

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTGCCTTACATCAAAATCAAAGCACAA
AGTGCTTTTTGCTTGTACAAACGCTGTTCCTATCACACAAATCGAATATG
TGCTAGATTTCTTTCAGTAACAGGTTTCTTAGAGCCATTACTCCCTGCTA
AAGTAAATCAATTAGATCGCCAAAGGTCCCATACCTAAGGTAAAGTTTGT
GGCCATGAATAAATTTGTCTTCTACATAAAGTTAGCTTAAATTAGTTCAC
AATGTTATAGCTCTTCAATTTATAAGCAGATACTAATACCTACATTTATA
ATCAGATATTAAATTATAACTATTCACAAAGGAAATATAAGCAAACAATC
CAGCTAGAAAGAACAATCTCATTAAGGAATGCTGAGATCTCAAGGAAACT
GTTAGACTCTTCTCAATATCCTAGCACATGGTGCCCTCTGATGGATTTTC
TAAGACAACATAAGACACACAAACAAGAATGTTTGTTTACTCTCTTAGGA
AGGAAGGAAATTTCTGTGACAAAAAAAAGTATATGAAACTGTAGGAGGGA
GATCTGCATACAGGGAAAACTGGANNAGGAATAATGAATTAATATTAGAC
TGAGCAAGAACCAAAGAGAAGATGGGGTGAAGGGAAGAGAGAAAAGGGAA
AAGGAGAAGGAGGGAACGGTAATTTGGGG

Query= MSMg01no183_m12.g1 MSMg01no183_m12.g1 CHROMAT_FILE:
MSMg01no183_m12.g1 PHD_FILE: MSMg01no183_m12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:53 2005
         (550 letters)



>mm_chrX_94275377_94276326
          Length = 950

 Score = 1033 bits (534), Expect = 0.0
 Identities = 546/550 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttgccttacatcaaaatcaaagcacaaagtgctttttgcttgtacaaacgctgttcctat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 ttgccttacatcaaaatcaaagcacaaagtgctttttgcttgtacaaacgctgttcctat 691

                                                                       
Query: 61  cacacaaatcgaatatgtgctagatttctttcagtaacaggtttcttagagccattactc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 cacacaaatcgaatatgtgctagatttctttcagtaacaggtttcttagagccattactc 631

                                                                       
Query: 121 cctgctaaagtaaatcaattagatcgccaaaggtcccatacctaaggtaaagtttgtggc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 cctgctaaagtaaatcaattagatcgccaaaggtcccatacctaaggtaaagtttgtggc 571

                                                                       
Query: 181 catgaataaatttgtcttctacataaagttagcttaaattagttcacaatgttatagctc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 catgaataaatttgtcttctacataaagttagcttaaattagttcacaatgttatagctc 511

                                                                       
Query: 241 ttcaatttataagcagatactaatacctacatttataatcagatattaaattataactat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ttcaatttataagcagatactaatacctacatttataatcagatattaaattataactat 451

                                                                       
Query: 301 tcacaaaggaaatataagcaaacaatccagctagaaagaacaatctcattaaggaatgct 360
           |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct: 450 tcacaaaggaaatataagcaaacaattcagctagaaagaacaatctcattacggaatgct 391

                                                                       
Query: 361 gagatctcaaggaaactgttagactcttctcaatatcctagcacatggtgccctctgatg 420
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gagatttcaaggaaactgttagactcttctcaatatcctagcacatggtgccctctgatg 331

                                                                       
Query: 421 gattttctaagacaacataagacacacaaacaagaatgtttgtttactctcttaggaagg 480
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 330 gattttctaagacaacataagacacacaaacaagaatatttgtttactctcttaggaagg 271

                                                                       
Query: 481 aaggaaatttctgtgacaaaaaaaagtatatgaaactgtaggagggagatctgcatacag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 aaggaaatttctgtgacaaaaaaaagtatatgaaactgtaggagggagatctgcatacag 211

                     
Query: 541 ggaaaactgg 550
           ||||||||||
Sbjct: 210 ggaaaactgg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space:   507600
Effective search space used:   507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)