TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTTACACTTTAAAAAATACAGATAAAGGAAACACTCCCAAAATT
AATCTATGAGAACAGTGTTATCCAATAGAGACACAAAGGTAGTGCTTATA
AAGACAATCAAAGCTATAGACAATAGTTTTACTAGATTGTAAAATTTTAA
ATTATGAGGAAAAAAAAAACAAATGAAATCTGGCAACATATAAAAAATAC
TTACATAGCATGACCAGATAGTACTTACTACAGGAACAGTATACTGTTTT
AATTACCTGAAATGAATTAGTGTAATGTATCATTAATAACTGGAGCACAA
ATCATGTGAATACCTAAAAAACAGAGACTCGAGTGTTTTTTCATGAATAA
AATTTTTAACAAAGTAGGACCAAGCAGAAATTTTCTCAAAGCAGTAAAGG
ATATACAAGAATAAAACATAACTATCGTCATATTCAAATAGAAAGAAGAA
AATATTTTTGCCTCAGATTACAAAAAGAATCAGGGCTATACGATCACATT
TACTTCTATTCACACACACACACACACACACACACACATACACACAAACA
CACACTCAACACAATTAGATAAGAAAAACAAAATATATTCTTATTGGAAG
AGAACATGTAATCCTTTCATTACAAATGACAGAAATATCTATTTATTTTA
TTTTATTGAAAAAGATTTTTCCCCTCTTATAAACATTTCAACCCAAGGTC
CC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTAAACTGAGGAATTTCAAATGGCT
GAGAAACACCTAAAGAAATGTTCAATCCTTAGTCATCAGGGAAATGCAAA
TCAAAACAACCATGATATTCCATCTCATACCAGTCAGAATGGCTAAAATA
AAAACTTCAGGTGACATCAGATGCTGGTGAGGATGTGGAAAAAGAGGAAC
ACTCCTCCATTTCTGGTGAGATTGTAAGCTGTTACAACCAGTCTGGAAGT
CAGCTTGGTGGTTCCTCACAAAATTGGACATAGTACTACTTGAGGATCCA
GCTATACCACAGAAGATGTTCCAATTTGCCCCACCGACACGTGCTCCACT
ATATTCATAGCAGCCCTATTCACAAGAGCCAGAAGCTGTAAAGAACCCAG
ATGTCCCTTAACAAAGGAATGGATTCAGAAAATGTGGTACATTTACACAA
TGGAGTACTACTCAGCTATTACAAACAATGGATTTACAAAATTCTTAGGC
AAATGGATGGATCTGGAGGATATCCTCCTGAGTGCAATAACCCAATCTCA
ATAGATTACCCACTGTATAAACTCACTTAAAAGCAAAAATTACTCCACCA
CCCGGGGAAACCCCAGATACGATTCTTATATCCAATCAAGCTTCCAGTAG
ATAGTCTTATCCTTCTGTGTCCATCTACACTCCGTTTCTATTAAGTTTTC
CCCACCCACG

Query= MSMg01no186_b21.b1 MSMg01no186_b21.b1 CHROMAT_FILE:
MSMg01no186_b21.b1 PHD_FILE: MSMg01no186_b21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:01 2005
         (595 letters)



>mm_chrX_127665263_127666257
          Length = 995

 Score =  917 bits (474), Expect = 0.0
 Identities = 520/544 (95%), Gaps = 16/544 (2%)
 Strand = Plus / Minus

                                                                       
Query: 53  attaatctatgagaacagtgttatccaatagagacacaaaggtagtgcttataaagacaa 112
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 995 attaatctatgagaacagtgttatccaatagagacacaaaggcagtgcttataaagacaa 936

                                                                       
Query: 113 tcaaagctatagacaatagttttactagattgtaaaattttaaattatgagg-aaaaaaa 171
           ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 935 tcaaagctacagacaatagttttactagattgtaaaattttaaattatgaggaaaaaaaa 876

                                                                       
Query: 172 aaacaaatgaaatctggcaacatataaaaaatacttacatagcatgaccagatagtactt 231
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 875 aaacaaatgaaatctggcaacatataaaaaatacttacatagcatggccagatagtactt 816

                                                                       
Query: 232 actacaggaacagtatactgttttaattacctgaaatgaattagtgtaatgtatcattaa 291
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 actacaggaacagtatactgttttaattacctgaaatgaattagtgtaatgtatcattaa 756

                                                                       
Query: 292 taactggagcacaaatcatgtgaatacctaaaaaacagagactcgagtgttttttcatga 351
           ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 755 taactggagcacaaatcatgtgaatgcct-aaaaacagagactcgagtgttttttcatga 697

                                                                       
Query: 352 ataaaatttttaacaaagtaggaccaagcagaaattttctcaaagcagtaaaggatatac 411
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 696 ataaaatttttaacaaagtaggaccaagcagaaattttctcaaagcagtaaaggatatat 637

                                                                       
Query: 412 aagaataaaacataactatcgtcatattcaaatagaaagaagaaaatatttttgcctcag 471
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 636 aagaataaaacataactatcatcatattcaaatagaaagaagaaaatatttttgcctcag 577

                                                                       
Query: 472 attacaaaaagaatcagggctatacgatcacatttacttctattcacacacacacacaca 531
           ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 576 attacaaaaagaatcagggctatacaatcacatttacttctattcacatacacacacaca 517

                                                                       
Query: 532 cacacacacacatacacacaaacacacactcaacacaattagataagaaaaacaaaatat 591
           ||||||              ||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 cacaca--------------aacacacactcaacacaattagataagaaaaacaaaatat 471

               
Query: 592 attc 595
           ||||
Sbjct: 470 attc 467


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space:   576225
Effective search space used:   576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)