TCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCATTGTTTTTAATAGCTGAGCAGTACTTCATTATGTAAATATATC
ACATTTTCCATATTCATTCCTCTATTGAAGGACATCTGGGTTCTTTCCAG
CTTCTGCCTATTATAAATAAGGCTACTATGAATATAGTGCAGCATGTGTC
CTTGTTGTATGTTGGAGCATATTTTGGAAATATGCCCAGGAGTGGTGTAG
CTGGGTCCTCAGGTAATACTATGTTCAATTTTCTGAGGAACAGCCAGATT
GATTTCCAGAGTGGTTGTACCAGCTTGCAATCCCACCAAAAATGGAAGAG
TATTCCTCTTTCTCCACATCCTCGCCAGCATCTTCTTTCATATGAGTTTT
TCATCTTTGGCATTCTGTCTGGTGTGAGGTGGAATCTCATGGTTCTTTTG
ATTTGCATTTCCTTGATGACTAAGGATGATGAACTTTTTTTTAGGTGCTT
TTCAGCCATTCCATATTCCTCAGTTGAGAATTCTTTGTTTAGCTCTGTAC
CCCAATTTTAGTAGGGTTATTTGATTCTCTGGAGTCTAACTTCTTGAGTT
CTTTGTATATATTAGACATTAGCCCTCCTGGATGTACGATTGGTAGAGAT
CTTTTCCCAGTCTGTTGTTTGCCATTTTGTCCGATAACTGATTGACATTT
TGGGGCTC

TCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAGTGCCATAGCCTGTGGTTGTCTATTT
ATTACTTGATACTGTAGCCCCTGGCACATAATATTTAATTCTGAACAATT
GTTTACCACTCTCATTCCCAATTCAGTGTTTTCATATCTCCTAGACTTTA
TGTTTAATGTCTGTGTATATTCCTCAGTAGTTGCTTGTTAGCATGATTTT
CCCAGTGATCTTGGGCACTCTTCCAACTAGCATTAATACTTTCTGTTTTC
TGAACATTATTTTATTGTTTACAAGTAGACTATACCTGTATGTAATGACT
TGAAAGTTAATAAGAGAAAATATTACACTCAATTTATTACAAGCACATGA
AGAAACACATGGCCATGACACACCAGGTGATTCATGGGTACAGAAATTAG
CAGAGGATACATTTAAATGATTAAAGTGAACAGACTCTCTTTTAAGAGAT
CAATATTATAAACACATTATTCATGATGGACGATTTCAGTGGTAAACCTA
GACGATTTCAGTATGGCAATTTGTGTGATTAAGTAGATATAAAAACGAAG
AAGAAATACCTTTTGACTGTTCAATGGCAGAAGAAGAATAGATAATTTAA
CAATTACTTAAACACATGATGAAGCAAATATGAGCCTCAATACCTATTGC
ATGTTATTT

Query= MSMg01no202_d02.g1 MSMg01no202_d02.g1 CHROMAT_FILE:
MSMg01no202_d02.g1 PHD_FILE: MSMg01no202_d02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:22:55 2005
         (636 letters)



>mm_chrX_80530298_80531333
          Length = 1036

 Score = 1214 bits (628), Expect = 0.0
 Identities = 634/636 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   agtgccatagcctgtggttgtctatttattacttgatactgtagcccctggcacataata 60
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 836 agtgccatagcctgtggttgtctatttattacttgatactgtagtccctggcacataata 777

                                                                       
Query: 61  tttaattctgaacaattgtttaccactctcattcccaattcagtgttttcatatctccta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 tttaattctgaacaattgtttaccactctcattcccaattcagtgttttcatatctccta 717

                                                                       
Query: 121 gactttatgtttaatgtctgtgtatattcctcagtagttgcttgttagcatgattttccc 180
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 716 gactttatgtttaatgtctgtgtatattcctcagtagttgctcgttagcatgattttccc 657

                                                                       
Query: 181 agtgatcttgggcactcttccaactagcattaatactttctgttttctgaacattatttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 agtgatcttgggcactcttccaactagcattaatactttctgttttctgaacattatttt 597

                                                                       
Query: 241 attgtttacaagtagactatacctgtatgtaatgacttgaaagttaataagagaaaatat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 attgtttacaagtagactatacctgtatgtaatgacttgaaagttaataagagaaaatat 537

                                                                       
Query: 301 tacactcaatttattacaagcacatgaagaaacacatggccatgacacaccaggtgattc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 tacactcaatttattacaagcacatgaagaaacacatggccatgacacaccaggtgattc 477

                                                                       
Query: 361 atgggtacagaaattagcagaggatacatttaaatgattaaagtgaacagactctctttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 atgggtacagaaattagcagaggatacatttaaatgattaaagtgaacagactctctttt 417

                                                                       
Query: 421 aagagatcaatattataaacacattattcatgatggacgatttcagtggtaaacctagac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 aagagatcaatattataaacacattattcatgatggacgatttcagtggtaaacctagac 357

                                                                       
Query: 481 gatttcagtatggcaatttgtgtgattaagtagatataaaaacgaagaagaaataccttt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gatttcagtatggcaatttgtgtgattaagtagatataaaaacgaagaagaaataccttt 297

                                                                       
Query: 541 tgactgttcaatggcagaagaagaatagataatttaacaattacttaaacacatgatgaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 tgactgttcaatggcagaagaagaatagataatttaacaattacttaaacacatgatgaa 237

                                               
Query: 601 gcaaatatgagcctcaatacctattgcatgttattt 636
           ||||||||||||||||||||||||||||||||||||
Sbjct: 236 gcaaatatgagcctcaatacctattgcatgttattt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space:   642276
Effective search space used:   642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)