Query= MSMg01no233_o10.b1 MSMg01no233_o10.b1 CHROMAT_FILE:
MSMg01no233_o10.b1 PHD_FILE: MSMg01no233_o10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:43 2005
(357 letters)
>mm_chrX_54412153_54412910
Length = 758
Score = 683 bits (353), Expect = 0.0
Identities = 356/357 (99%), Gaps = 1/357 (0%)
Strand = Plus / Minus
Query: 1 tagggcctaagttattgctgatattataataactgttgatgtcaaaaactgtcacataga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tagggcctaagttattgctgatattataataactgttgatgtcaaaaactgtcacataga 498
Query: 61 aaggacacaattagtttctgagaatgtaaacttaatgaagacaaaatcatggcaagagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aaggacacaattagtttctgagaatgtaaacttaatgaagacaaaatcatggcaagagga 438
Query: 121 agcaattagtcctaataatttgggtacctttgtttttcctttccctgactgtggagcttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 agcaattagtcctaataatttgggtacctttgtttttcctttccctgactgtggagcttg 378
Query: 181 aattaagatgaagtgttctagactggctgtcaatagtattgattggtctcacaagataat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aattaagatgaagtgttctagactggctgtcaatagtattgattggtctcacaagataat 318
Query: 241 tactcccttcttgcctcacggttcttgagtgagctaactggagttgctattttcatagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tactcccttcttgcctcacggttcttgagtgagctaactggagttgctattttcatagaa 258
Query: 301 gggccaggtactcaagactttccttcctgattt-aaaagtatttaaaaggaaggagg 356
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 257 gggccaggtactcaagactttccttcctgatttaaaaagtatttaaaaggaaggagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 357
Length of database: 758
Length adjustment: 9
Effective length of query: 348
Effective length of database: 749
Effective search space: 260652
Effective search space used: 260652
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no233_o10.g1 MSMg01no233_o10.g1 CHROMAT_FILE:
MSMg01no233_o10.g1 PHD_FILE: MSMg01no233_o10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:43 2005
(344 letters)
>mm_chrX_54342643_54343385
Length = 743
Score = 658 bits (340), Expect = 0.0
Identities = 343/344 (99%), Gaps = 1/344 (0%)
Strand = Plus / Plus
Query: 1 tctggcataactaggtgttctatagactgtagctttaaaacgctactgtctccacatact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctggcataactaggtgttctatagactgtagctttaaaacgctactgtctccacatact 260
Query: 61 cattcctttatccttcccaacacatttttttttgtattgtcatctccacaaatctgaaca 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 cattcctttatccttcccaacacatttttttt-gtattgtcatctccacaaatctgaaca 319
Query: 121 tacgtcatacttttatcgaggaataattcagctactgtgaaatagatcttgagtgtagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tacgtcatacttttatcgaggaataattcagctactgtgaaatagatcttgagtgtagaa 379
Query: 181 cttgatgagttttgactagtgtaaccaccaccctgatcaagacaaaagaaagacgcggcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cttgatgagttttgactagtgtaaccaccaccctgatcaagacaaaagaaagacgcggcc 439
Query: 241 accacgtggtccctgtaatcctagctctcaggagtctgaggcaagaaaaatatgcatttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 accacgtggtccctgtaatcctagctctcaggagtctgaggcaagaaaaatatgcatttg 499
Query: 301 agacaaacctgggctacacagagagaccttcatgcactgaggag 344
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agacaaacctgggctacacagagagaccttcatgcactgaggag 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 743
Length adjustment: 9
Effective length of query: 335
Effective length of database: 734
Effective search space: 245890
Effective search space used: 245890
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
