CATATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCATATATATGTCTAAATGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGAATTTCAAGCCCCACAGCTGGGCATGGTCTGTATAGCCACTAATT
CAAATTTAATAAGCTTTGCTAATATAACTAACTGTAAATGCTTTCTCTGT
GGTCCATACTATCTACTTTTGATTATTTCCCCTAAGACTGGCTAACATCT
CAGTATTTTTACTAGTTAATTGGTGTAAAGTTCTCATCATAGTGTGGATA
TCTACAGTAAGTAATCAATCAATTTTATAATTTTTCATTTTGCCACACTG
TATAGTCTTTTGCTCAATTAAGGCATTTGATTACTAATTATAAAGATAGT
TCTTCTTAACTGTACCACGCTTCTCCTCTGAGAGACTCTCCCAGCAGCTC
ACTGAGACAGATGCTGATTATGTACAGCCAAGCATTGGACTGAGGTCATG
GACCTCTATGGAAGAATAAGGGGAAGGTTCAAAGGAGCTGATGGGAATGG
TAACCCCATAAGAAGACCAATAGTGTCAAATAATTAGGACCCCTTAGATC
TCCAAGAGTCTAAGCCACCAACCAAAGAGCATATATGGGCTTTCTCTGAG
GCCCTCTACAACATATTGAATCATAGGGCTGCCCTTGCCTGACCTCAAGG
TGTTTGGTCCCCTCAAAATTGAAAGG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTGTACCCCATTT
TTAAATGAGTTGTTTGATTTTCTGGAGTCCAGCTTCTTGCATTCTTTGTA
TATATTGGATATCAGTCCCCTATTGAGTTTAGAGTTGTTAAAGATCCTCT
CCCAATCTGTTGGTGGCCTTTTTGTCTTATTGACAGTGTCTTTTGACTTA
CAGAAGCTTTGCGATTTTATGAGGTCACTTTTGTCAATTCTAGATCTTAT
AGCACAAGCCATTGCTGTACTGTTCTGGTATTCCCCCCACCCCCACCCCC
GTGCCCATATCTTTGAGGCTTTTACCCTCTTTCTCTTCTATAAGTTTCAG
TGTCTCTGGTTTTATGTGGAGTTCCTTGATCAATGTAGACTTGACCTTAG
TATAAGTGGATAAGAATGGATCAATTCACATTCTTCTCAATGATAACCAC
CAGTTGAGCCAGCAACATTTTTTGAAAATGTTGTCTTTTCCCATTGGATT
GTTTTAGGTCCTTTGTTAAAGATCAAGTGGCCATATGTGTGTGGGTTCAA
TTCTGGGTCTTCAGTTCTATTCCACTAATCTACCTGTCAGTCATTGTACC
AGTACCTTGTAATTTTGATCACAATTGCTCTGTACTATAACTTGAGGTCA
GGCATGGTAAATCCACCAGA

Query= MSMg01no237_l09.b1 MSMg01no237_l09.b1 CHROMAT_FILE:
MSMg01no237_l09.b1 PHD_FILE: MSMg01no237_l09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:36 2005
         (414 letters)



>mm_chrX_14771814_14772627
          Length = 814

 Score =  754 bits (390), Expect = 0.0
 Identities = 408/414 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   ggcatggtctgtatagccactaattcaaatttaataagctttgctaatataactaactgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ggcatggtctgtatagccactaattcaaatttaataagctttgctaatataactaactgt 430

                                                                       
Query: 61  aaatgctttctctgtggtccatactatctacttttgattatttcccctaagactggctaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 aaatgctttctctgtggtccatactatctacttttgattatttcccctaagactggctaa 370

                                                                       
Query: 121 catctcagtatttttactagttaattggtgtaaagttctcatcatagtgtggatatctac 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 369 catctcagtatttttactagttaattggtgtaaagttctcatcatagtgtggatatatac 310

                                                                       
Query: 181 agtaagtaatcaatcaattttataatttttcattttgccacactgtatagtcttttgctc 240
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 309 agtaagtaatcaaccaattttataatttttcattttgccacactgtatagtctgttgctc 250

                                                                       
Query: 241 aattaaggcatttgattactaattataaagatagttcttcttaactgtaccacgcttctc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||
Sbjct: 249 aattaaggcatttgattactaattataaagatagttcttcttaactgtagcatggttctc 190

                                                                       
Query: 301 ctctgagagactctcccagcagctcactgagacagatgctgattatgtacagccaagcat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ctctgagagactctcccagcagctcactgagacagatgctgattatgtacagccaagcat 130

                                                                 
Query: 361 tggactgaggtcatggacctctatggaagaataaggggaaggttcaaaggagct 414
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 tggactgaggtcatggacctctatggaagaataaggggaaggttcaaaggagct 76


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space:   326025
Effective search space used:   326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)