Query= MSMg01no261_a21.b1 MSMg01no261_a21.b1 CHROMAT_FILE:
MSMg01no261_a21.b1 PHD_FILE: MSMg01no261_a21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:21 2005
(348 letters)
>mm_chrX_70755735_70756482
Length = 748
Score = 642 bits (332), Expect = 0.0
Identities = 340/343 (99%)
Strand = Plus / Minus
Query: 5 ggaattctgagttctgtgacagtctagggactaacaaagttcccaagtgaggtcagaaag 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ggaattctgagttctgggacagtctagggactaacaaagttcccaagtgaggtcagaaag 488
Query: 65 ggaaaattggatggctcattctccaaaatgttcattcagagaaacagagaggctagtggt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ggaaaattggatggctcattctccaaaatgttcattcagagaaacagagaggctagtggt 428
Query: 125 caccattcaagataggtatcagttggaatggaatggccacagagcattccccatttcttc 184
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 427 caccattcaagataggtatcagttggaatggaatagccacagagcattccccatttcttc 368
Query: 185 tcttccttgattccctctttgcttttttgttgtgctgtccaggaactccagtggcactag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tcttccttgattccctctttgcttttttgttgtgctgtccaggaactccagtggcactag 308
Query: 245 ggaacatgtcaatgggatttattttgagggtaagatgaaagattcaatacaaactcttta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ggaacatgtcaatgggatttattttgagggtaagatgaaagattcaatacaaactcttta 248
Query: 305 aggaacagataacttganaaaggaaatgtggactggtggcaac 347
||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 247 aggaacagataacttgataaaggaaatgtggactggtggcaac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 748
Length adjustment: 9
Effective length of query: 339
Effective length of database: 739
Effective search space: 250521
Effective search space used: 250521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no261_a21.g1 MSMg01no261_a21.g1 CHROMAT_FILE:
MSMg01no261_a21.g1 PHD_FILE: MSMg01no261_a21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:21 2005
(459 letters)
>mm_chrX_70608291_70609151
Length = 861
Score = 837 bits (433), Expect = 0.0
Identities = 457/473 (96%), Gaps = 14/473 (2%)
Strand = Plus / Plus
Query: 1 tagtattcattttcataccctgagtttcagaattgcctcagacctgtcaa--ctgtttgg 58
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 tagtattcattttcataccctgagtttcagaattgcctcagacctgtcaactctgtttgg 260
Query: 59 cccttggcatccataagctatactcttgcccactgcccacctgctgctgatggttttgag 118
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccttggcatccataagctacactcttgcccactgcccacctgctgctgatggttttgag 320
Query: 119 gcagctaacttcaaaagaaaagttttagcaacatgtttgccagaaggaaatttgtgccta 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcagctaacttcaaaagaaaagttttagcaacatgtttgccagaaggaaatttgtgccta 380
Query: 179 gaattaacaatgtagtcttgtgctggctactgttttgtcatcttgacacaagctagagtc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaattaacaatgtagtcttgtgctggctactgttttgtcatcttgacacaagctagagtc 440
Query: 239 atctttaaaaaaaaaaaaaaaa------------gaacctcagttgtgaaaatgccccca 286
|||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 atctttaaaaaaaaaaaaaaaaaaaaaaaaaaaggaacctcagttgtgaaaatgccccca 500
Query: 287 ctaaattggcctgtgggcaatcctgtgaggtaatttctttcttgattaatgatgtgggag 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctaaattggcctgtgggcaatcctgtgaggtaatttctttcttgattaatgatgtgggag 560
Query: 347 gagccagcctattgtgggaagtgccactattaggcagtggtactggatggtattttttta 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gagccagcctattgtgggaagtgccactattaggcagtggtactggatggtattttttta 620
Query: 407 aatgctggcttagctagtcatgagggaggcaataagcagcattcttccatgat 459
||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 621 aatgctggcttagctagtcatgagggaggcagtaagcagcattcttccatgat 673
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 861
Length adjustment: 10
Effective length of query: 449
Effective length of database: 851
Effective search space: 382099
Effective search space used: 382099
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
