Query= MSMg01no261_b21.b1 MSMg01no261_b21.b1 CHROMAT_FILE:
MSMg01no261_b21.b1 PHD_FILE: MSMg01no261_b21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:26 2005
(297 letters)
>mm_chrX_5758340_5759035
Length = 696
Score = 520 bits (269), Expect = e-152
Identities = 290/297 (97%), Gaps = 1/297 (0%)
Strand = Plus / Minus
Query: 1 agccaagcagccagaacaagggaaggcacagagacaggagctggggggaagctcccgcga 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 496 agccaagcagccagaacaagggaaggcacagagacaggagctggggggaagctcaag-ga 438
Query: 61 gacttcctgagctgggtagtccattctatgaaccctagaatttgatctcatgtgcctatg 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 437 gacttcctgagctgggtagtccattctatgaaccctagaacttgatctcatgtgcctatg 378
Query: 121 taacaactactagatactgaaaagctgcatagctgtgaatcttaatgttatccttgacca 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 377 taacaactactagatactgaaaagctgcatagctgtgaatcttaatgttatccttgccca 318
Query: 181 tatgcaatggatgctctctgcttcaaagggatttttaaaagattgtacagaagaagataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tatgcaatggatgctctctgcttcaaagggatttttaaaagattgtacagaagaagataa 258
Query: 241 atgcaatgcctattgtagcatggatgatgagtactgtgtctaaagattagtctaggg 297
||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 257 atgcaatgcctattgcagcgtggatgatgagtactgtgtctaaagattagtctaggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 696
Length adjustment: 9
Effective length of query: 288
Effective length of database: 687
Effective search space: 197856
Effective search space used: 197856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no261_b21.g1 MSMg01no261_b21.g1 CHROMAT_FILE:
MSMg01no261_b21.g1 PHD_FILE: MSMg01no261_b21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:26 2005
(593 letters)
>mm_chrX_5616081_5617075
Length = 995
Score = 1050 bits (543), Expect = 0.0
Identities = 587/615 (95%), Gaps = 23/615 (3%)
Strand = Plus / Plus
Query: 1 tgtggagccaggatggtaccttagtcaataaagtgcttggcatgcaactataaggatacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tgtggagccaggatggtaccttagtcaataaagtgcttggcatgcaactataaggatacg 241
Query: 61 agttcaatccctgtaagttttgttgaaaaaaaaaaaaagccatgtctacaggaacacagt 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 242 agttcaatccctgtaagttttgttg-aaaaaaaaaaaagccatgtctacaggaacacagt 300
Query: 121 tgtggtctcaatgcatgccagggagaaggagatttgggaacatccatgtttacatacaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgtggtctcaatgcatgccagggagaaggagatttgggaacatccatgtttacatacaag 360
Query: 181 ttccagaccaataagagacccagtttcaaaaagtaaggtaagat---------------- 224
|||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 361 ttccagaccaataagacacccagtttcaaaaagtaaggtaagataaataaaataaaataa 420
Query: 225 ----aaataaaataaaataaaataaaataaaataaaatgtgtataacatccgagggtaag 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aataaaataaaataaaataaaataaaataaaataaaatgtgtataacatccgagggtaag 480
Query: 281 caagaggttatcttctgttctccatacaaaatgatatacacatgaccc--cccccaaccc 338
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 481 caagaggttatcttctgttctccatacaaaatgatatacacatgacccctcccccaaccc 540
Query: 339 aaccatgttgtattagcctgagaaagaagaacggattgtacagatttgatgaaaagtcta 398
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaccatgttgtattagtctgagaaagaagaacggattgtacagatttgatgaaaagtcta 600
Query: 399 tgcaatggattgtcagagtcctcaccttagtcccagccctgggacttcaagctctgcggt 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgcaatggattgtcagagtcctcaccttagtcccagccctgggacttcaagctctgcggt 660
Query: 459 tagaaggatgtgctcctagcaatctccctagctttcatttaataatctaggaacatggaa 518
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 661 tagaaggatgtgctcctagcaatctccatagctttcatttaataatctaggaacatggaa 720
Query: 519 tggagatcacagggatcctacaaagttgtcagtgaaatgtgaataacatctggcccatgg 578
|||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 721 tggagaccacagggatcctacaaagttgtcagtgaaatgtgaaaaacatctggcccatgg 780
Query: 579 tcagaccacaaataa 593
|||||||||||||||
Sbjct: 781 tcagaccacaaataa 795
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 995
Length adjustment: 10
Effective length of query: 583
Effective length of database: 985
Effective search space: 574255
Effective search space used: 574255
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
