XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTT
CAAAGATTGCCATACTAATGGGTCCCAGAAAGCCCATGACTTCATTTCCT
GTCAACAGAGGCCTTTAATGGCACTTAAAGCCTTCACATTTCCTTTACTT
ACCTCAGTTGATGGCAAGAGCAGGTCAACACAAGCAGCCGAGACAATGCA
GGTCCATTGTTATCCAACTCCCCCTGGCAACCTCTTACACATTCAAATCA
CTATCATGGGATCTATCATGGGAAAGCTCTTTCTTCCATTCTCCCAACTA
GTTCTGCTCCAAGAAACTACCTGTATGTTTTTGAGTTAAGCATTTGGTTT
CTGATGGTGGAGAGATGACTCAGTGGTTAAGAGAACTGGCTGCTCTTCCA
GGGGAGCTGGGCCTCTTTCTCAGCACCCATGTGACAGCTCACAAGTGTCA
GTTAACTCCATCCAGTTCTAGGGAACCTGACACCCCACTTCTGGCTTCTG
TGGACACTGCACATATAAGATGCCCTGACACAGATGCAGGCAAAACACTC
AAATACATATAATAAATAATAATTTCTTTTAAAAATAACTAATTGGTAAG
CACTGCCATATATCTACATAAGGTCTCAATATCACTTTGGCCCTGTTCTC
TGGCACTTTTCTTCTTTTGCCAATACAGAAGGTGGCTTCTGATCTATTCC
CCCAAGTCTTGTACCTACTTGCTCACTGCCCAACTGTCGCTGCCCACCCC
CAATATGG

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXACTGCTCCAGCTGTACAAAAATGTCTGC
AATTTAGGAAGGACCATTGCCTTTTCTGTTTGGATAGAAACTGTAAAGTG
GACATGGTAGTATATGCTTAACCCTAGCACGTGGGAGGCAGAGGCAGAGG
CAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCA
GAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGA
GGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGGTGGATCTC
TGCTGGGTCCAGCATGGCCTTAGTGGGAACAGAAGGACAGGTTCCTACCC
CTTGGGCCGGGCCAGTAGGCGTGCACCTCCACAAGTATCGAGGGCTGCCA
CAGGCATAAGGCTTGTCTGTGTAATGATGTACATATTTCACACTCCTCCT
TAGAGGACTGTTCTCCCTGTTAATGTTAGTGACTCCATGATAATCAGAGA
CAGCACAAGTCCAGGAGACCAAGGTGCGGCTAATGTCTCAGCTAAATGGT
AAACACCGGGACTTTCAGGACAGCCTTTAAGACTTTGAATAAGACCTCAA
AAATTCCGAGAGAGAGATAATATTTCTCAACTATAGAAATATACTGATGC
ACTGTGCCTCATGAGGGGCTTCATGATCTTA

Query= MSMg01no262_l21.b1 MSMg01no262_l21.b1 CHROMAT_FILE:
MSMg01no262_l21.b1 PHD_FILE: MSMg01no262_l21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:28 2005
         (621 letters)



>mm_chrX_156093292_156094312
          Length = 1021

 Score =  905 bits (468), Expect = 0.0
 Identities = 489/496 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   atactaatgggtcccagaaagcccatgacttcatttcctgtcaacagaggcctttaatgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 atactaatgggtcccagaaagcccatgacttcatttcctgtcaacagaggcctttaatgg 437

                                                                       
Query: 61  cacttaaagccttcacatttcctttacttacctcagttgatggcaagagcaggtcaacac 120
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 cacttaaagccttcacacttcctttacttacctcagttgatggcaagagcaggtcaacac 377

                                                                       
Query: 121 aagcagccgagacaatgcaggtccattgttatccaactccccctggcaacctcttacaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 aagcagccgagacaatgcaggtccattgttatccaactccccctggcaacctcttacaca 317

                                                                       
Query: 181 ttcaaatcactatcatgggatctatcatgggaaagctctttcttccattctcccaactag 240
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ttcaaatcactatcataggatctatcatgggaaagctctttcttccattctcccaactag 257

                                                                       
Query: 241 ttctgctccaagaaactacctgtatgtttttgagttaagcatttggtttctgatggtgga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ttctgctccaagaaactacctgtatgtttttgagttaagcatttggtttctgatggtgga 197

                                                                       
Query: 301 gagatgactcagtggttaagagaactggctgctcttccaggggagctgggcctctttctc 360
           |||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||
Sbjct: 196 gagatggctcagtggttaagagaactggctgctcttccaggggagctgggtttctttctc 137

                                                                       
Query: 361 agcacccatgtgacagctcacaagtgtcagttaactccatccagttctagggaacctgac 420
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 ggcacccatgtgacagctcacaagtgtcagttaactccatccagttctagggaacctgac 77

                                                                       
Query: 421 accccacttctggcttctgtggacactgcacatataagatgccctgacacagatgcaggc 480
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76  accccacttctggtttctgtggacactgcacatataagatgccctgacacagatgcaggc 17

                           
Query: 481 aaaacactcaaataca 496
           ||||||||||||||||
Sbjct: 16  aaaacactcaaataca 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space:   617721
Effective search space used:   617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)