GCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTCTGGTGAAGACATTTTATAAATAATGATTTCTGACCTCTGAAC
TTCAAAGTTCATCACCTGAGGTCATGCTTAGAATCCTACATTTCTAAGAA
GAATTCAGGTGATACAGACATAAATATTATAGGAATACACATTTAGAAAC
TCCACATTAAAGCTTGTTTCTCTTCACATGATTGCAACCCTGTAATTTTG
ATCTTATAATACATGAAAAGTGGTTATGAAATCAATGAATGCTTAGAAGG
ACCACTGAAAATCTCTGCTTCACTAGGTTGTTTTAAGTGGATTTTGTCAT
TTCTATCTTAAATGTTAACCACTTAGAAACATAGAGCATTCTTTACTCAT
ATTCCACTTTTAAAGAATAGTTCCACAGGCTTCAGTGGTACATGCCTTTA
ATCACAAGCCTCAGAAGGCAGATGCTGGCACAGTTTTGTGAGTTCAATGC
AAGGGTGGTATAGTGTAGTGAGTTCCAGGATAGCCAATGCTGTGTAAAAA
GATTATGTCTCAACCTGCCCCTTCAAACGAAAATAAAAGAATTTTTTTGT
AGAAATGAGTAATAGTTCATTGATTGGAATATATAAGGAATATTCTCCTA
AAAATAACAAGTCCATGTGGTTGTAAGCTGAAAGCTTCTACTTGTGGTAA
AAAATTGACATGTAGCCTTTCTTAATGGGCACTTTCTN

NCCCACAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGTGGAAGAATACTGAA
TGGCTGAGAAGTACCTAAAGAAATGTTCAACATGCTTAGTCATCAAGAAA
ATGAAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGC
TAAGATACTCAGGTGACAGCAAATACTAGCGAGGATGTGGAGAAAGAGGA
ACACTTCTCCATTGATTGTGGGATTATAATCCAGCAGAACTACTCTGGAA
ATGACTTTGGAAATTCCTCAGAAAATTAGAAATAGTAATACCTGAGAAGC
CAGCTGTACCTCTCCTAGGCATATACCCAGAAGATGCTCCAACATGTAAT
TAGGACACATACTCCACTATGTTCATAGAAGCCTTATTTATAATATTCAG
GAGCTAGAAATAACATAGATGTCCCTCAACAGAGGAATGGATACAGAAAA
TGTGGTACATTTACACAATGGAGCACTACTCAGCTATTAAAAACAATGAA
TTCTTAAAGTTCTTAGGCAAATGCATGCAAATAGAAAATATCATCCTGAA
TGAGGTAACCCAGTCACAAAATAAATAGATAGATAGATAGATAGATAGAT
AGATAGATAGATAGATAGATAGATAGATAGATTGACTTTTCCTTTTTTCC
CTTTCCCTTTCCTTTTCTCTTTCCTTTTTTTCTTCCTCCTTT

Query= MSMg01no263_c10.b1 MSMg01no263_c10.b1 CHROMAT_FILE:
MSMg01no263_c10.b1 PHD_FILE: MSMg01no263_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:59 2005
         (692 letters)



>mm_chrX_124933413_124934504
          Length = 1092

 Score = 1122 bits (580), Expect = 0.0
 Identities = 586/588 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctctggtgaagacattttataaataatgatttctgacctctgaacttcaaagttc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 gaattctctggtgaagacattttataaataatgatttctgacctctgaacttcaaagttc 529

                                                                       
Query: 65  atcacctgaggtcatgcttagaatcctacatttctaagaagaattcaggtgatacagaca 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 atcacctgaggtcatgcttagaatcctacatttctaagaagaattcaggtgatacagaca 469

                                                                       
Query: 125 taaatattataggaatacacatttagaaactccacattaaagcttgtttctcttcacatg 184
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 taaatattatacgaatacacatttagaaactccacattaaagcttgtttctcttcacatg 409

                                                                       
Query: 185 attgcaaccctgtaattttgatcttataatacatgaaaagtggttatgaaatcaatgaat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 attgcaaccctgtaattttgatcttataatacatgaaaagtggttatgaaatcaatgaat 349

                                                                       
Query: 245 gcttagaaggaccactgaaaatctctgcttcactaggttgttttaagtggattttgtcat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gcttagaaggaccactgaaaatctctgcttcactaggttgttttaagtggattttgtcat 289

                                                                       
Query: 305 ttctatcttaaatgttaaccacttagaaacatagagcattctttactcatattccacttt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ttctatcttaaatgttaaccacttagaaacatagagcattctttactcatattccacttt 229

                                                                       
Query: 365 taaagaatagttccacaggcttcagtggtacatgcctttaatcacaagcctcagaaggca 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 taaagaatagttccacaggcttcagtggtacatgcctttaatcacaagcctcagaaggca 169

                                                                       
Query: 425 gatgctggcacagttttgtgagttcaatgcaagggtggtatagtgtagtgagttccagga 484
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 gatgctggcacagttttgttagttcaatgcaagggtggtatagtgtagtgagttccagga 109

                                                                       
Query: 485 tagccaatgctgtgtaaaaagattatgtctcaacctgccccttcaaacgaaaataaaaga 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 tagccaatgctgtgtaaaaagattatgtctcaacctgccccttcaaacgaaaataaaaga 49

                                                           
Query: 545 atttttttgtagaaatgagtaatagttcattgattggaatatataagg 592
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48  atttttttgtagaaatgagtaatagttcattgattggaatatataagg 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 692
Length of database: 1092
Length adjustment: 10
Effective length of query: 682
Effective length of database: 1082
Effective search space:   737924
Effective search space used:   737924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)