Query= MSMg01no266_i05.b1 MSMg01no266_i05.b1 CHROMAT_FILE:
MSMg01no266_i05.b1 PHD_FILE: MSMg01no266_i05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:19 2005
(605 letters)
>mm_chrX_110809172_110810175
Length = 1004
Score = 1065 bits (551), Expect = 0.0
Identities = 579/593 (97%), Gaps = 9/593 (1%)
Strand = Plus / Minus
Query: 17 gaattcattataat----ttccctcgggcctataaacatgataaatgcaagaaaatacaa 72
|||||||||||||| || |||||||||||||||||||||||||||||| ||||
Sbjct: 609 gaattcattataataacatt-----gggcctataaacatgataaatgcaagaaaacacaa 555
Query: 73 acatttgaatgatcaattattaagcaaaaaatggaagtattctaccattttagcactgtg 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 acatttgaatgatcaattattaagcaaaaaatggaagtattctaccattttagcactgtg 495
Query: 133 ttcaagatatgaattaccttaccattacagcattgcaatctgtaaaaggattaagcaaac 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ttcaagatatgaattaccttaccattacagcattgcaatctgtaaaaggattaagcaaac 435
Query: 193 attgtcaaagaaatataaatttagaagacactaaatcataccacatgatattaatgtggt 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 attgtcaaagaaatataaatttagaagacactaaatcataccacatgatattaatgtggt 375
Query: 253 agtgctgtattacagcagcaaaaacacacaccaatcctaggcttaaaaattgtcaatatt 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 agtgctgtattacagcagcaaaaacacacaccaatcctaggcttaaaaattgtcaatatt 315
Query: 313 tacattgtaacaacctgtagcctatatcaaacattaactagcatatctagaattgagcta 372
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 314 tacattgtaacaacctgtagcctacatcaaacattaactagcatatctagaattgagcta 255
Query: 373 ccagttttcttttttcccactttattttattttattgattcttttttatatactccagat 432
|||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ccagttttcttttttcttattttattttattttattgattcttttttatatactccagat 195
Query: 433 tttatcctgttctcagttcaccctctgacatttccacatcctataccacctgtaccccaa 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 tttatcctgttctcagttcaccctctgacatttccacatcctataccacctgtaccccaa 135
Query: 493 gatactggttttcatatcatgtacactatatgaacttgaataaaaatattttttggtctt 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 gatactggttttcatatcatgtacactatatgaacttgaataaaaatattttttggtctt 75
Query: 553 tttgagacagggtttctctgtataaccctggctgtcctggaactcgctttgta 605
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 tttgagacagggtttctctgtataaccctggctgtcctggaactcgctttgta 22
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1004
Length adjustment: 10
Effective length of query: 595
Effective length of database: 994
Effective search space: 591430
Effective search space used: 591430
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no266_i05.g1 MSMg01no266_i05.g1 CHROMAT_FILE:
MSMg01no266_i05.g1 PHD_FILE: MSMg01no266_i05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:19 2005
(236 letters)
>mm_chrX_110635717_110636351
Length = 635
Score = 449 bits (232), Expect = e-131
Identities = 235/236 (99%), Gaps = 1/236 (0%)
Strand = Plus / Plus
Query: 1 gagtatggtattgtatattgcagtgtgcctactggcaccattgcaagttcagcaccctgg 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gagtatggtat-gtatattgcagtgtgcctactggcaccattgcaagttcagcaccctgg 259
Query: 61 gaaaggcaatgctttcaaacacgaataattgatgaattgtatgtaatatgcaaatgtgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gaaaggcaatgctttcaaacacgaataattgatgaattgtatgtaatatgcaaatgtgaa 319
Query: 121 tgcataaatctcctgaatgacagcttaatttatgtgcgcttttaagaatgtgggattaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tgcataaatctcctgaatgacagcttaatttatgtgcgcttttaagaatgtgggattaga 379
Query: 181 ttttaattaaatatcttcaaaggcatcctgacttattctggttttgggcttctgtc 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttttaattaaatatcttcaaaggcatcctgacttattctggttttgggcttctgtc 435
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 635
Length adjustment: 9
Effective length of query: 227
Effective length of database: 626
Effective search space: 142102
Effective search space used: 142102
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
