Query= MSMg01no275_n01.b1 MSMg01no275_n01.b1 CHROMAT_FILE:
MSMg01no275_n01.b1 PHD_FILE: MSMg01no275_n01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:37 2005
(695 letters)
>mm_chrX_66642124_66643218
Length = 1095
Score = 1290 bits (667), Expect = 0.0
Identities = 685/691 (99%)
Strand = Plus / Minus
Query: 5 gaattcattcatatgcaaaaaggaaagcatggaagattaactgatagtcactccaaggtc 64
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 gaattcgttcatatggaaaaaggaaagcatggaagattaactgatagtcactccaaggtc 836
Query: 65 atcaaactgtttctaacttggaaaatgtttaaagattaaataaataaaaggttgctgggc 124
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 835 atcaaactgtttctaacttggaaaatgtttaaaaatcaaataaataaaaggttgctgggc 776
Query: 125 attttcatgctataagtttatgttgtaatgtcactcatatttataaactccagtacatct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 attttcatgctataagtttatgttgtaatgtcactcatatttataaactccagtacatct 716
Query: 185 tgggcatattatcatagtataagagcagtagttactagatagttaacatctagtcttcaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 tgggcatattatcatagtataagagcagtagttactagatagttaacatctagtcttcaa 656
Query: 245 ataaaaagtgagaaactttcccacttatgacctgatagacctgatcattgcaacacttag 304
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 655 ataaaaagtgagaaactttcccacttatgacctgatagacctgataattgcaacacttag 596
Query: 305 cacagtagctgatatttccttactatttaatgtaaataaaatactagcttagggaactct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 cacagtagctgatatttccttactatttaatgtaaataaaatactagcttagggaactct 536
Query: 365 gctgataggaaatctttaattgttcatagctgccttggaaagtcataggtatcattagtg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 gctgataggaaatctttaattgttcatagctgccttggaaagtcataggtatcattagtg 476
Query: 425 ctacataccagacactcttttaagccctttcacatagcaatatgtccagacaacacaaaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ctacataccagacactcttttaagccctttcacatagcaatatgtccagacaacacaaaa 416
Query: 485 taccctttcttttaggctatgaagggggagatgtaataatgaaggtagcattgagacttg 544
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 415 taccctttcttttaggctatgaagggggagatgtaataataaaggtagcattgagacttg 356
Query: 545 agtgagacttgagtggctccaggacctgctgactactcatttgctgttttctcatccttt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 agtgagacttgagtggctccaggacctgctgactactcatttgctgttttctcatccttt 296
Query: 605 cagcagttctaagaaagtagctatgtgttttcattcctcaaaacacagttaaagaaaatg 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 cagcagttctaagaaagtagctatgtgttttcattcctcaaaacacagttaaagaaaatg 236
Query: 665 ttcccattttctttgaatctctacagccatc 695
|||||||||||||||||||||||||||||||
Sbjct: 235 ttcccattttctttgaatctctacagccatc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 695
Length of database: 1095
Length adjustment: 10
Effective length of query: 685
Effective length of database: 1085
Effective search space: 743225
Effective search space used: 743225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no275_n01.g1 MSMg01no275_n01.g1 CHROMAT_FILE:
MSMg01no275_n01.g1 PHD_FILE: MSMg01no275_n01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:37 2005
(668 letters)
>mm_chrX_66486516_66487584
Length = 1069
Score = 1270 bits (657), Expect = 0.0
Identities = 666/669 (99%), Gaps = 1/669 (0%)
Strand = Plus / Plus
Query: 1 aatcaacaaaacctctagatgcttggatgtcatggacagtgagatttatcttttccttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatcaacaaaacctctagatgcttggatgtcatggacagtgagatttatcttttccttta 260
Query: 61 attagcttctaggtattgttgcctctttccacagaacattggatttttatactttttcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attagcttctaggtattgttgcctctttccacagaacattggatttttatactttttcca 320
Query: 121 agtgaattattgaatcactcttactcgagtgtctaatcatactttatgcattgtttacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtgaattattgaatcactcttactcgagtgtctaatcatactttatgcattgtttacat 380
Query: 181 gagaatgtgggggcacaaggaggataatatagtggtcaaaaatgcgatttggagatagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagaatgtgggggcacaaggaggataatatagtggtcaaaaatgcgatttggagatagca 440
Query: 241 gagattaaatcccccactttcctaccgcttagttacatgataatggaacagtgttcaaaa 300
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 gagattaaatcccccactttcctactgcttagttacatgataatggaacagtgttcaaaa 500
Query: 301 cttgccatctttagttttctcattagtaaaatagagaaaataatgggatctgcttattaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttgccatctttagttttctcattagtaaaatagagaaaataatgggatctgcttattaa 560
Query: 361 gactgcatcgtgtataagcaagctaatgcaggcagtgctcagctgagatgtgttcaagca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gactgcatcgtgtataagcaagctaatgcaggcagtgctcagctgagatgtgttcaagca 620
Query: 421 gtgccagccattatttcctgagggaggctgagaagtctatattactcattgtctaggaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtgccagccattatttcctgagggaggctgagaagtctatattactcattgtctaggaca 680
Query: 481 tgagaaatatgggaaatattggttttgaagtaatgaataatgttagatacaaacatagaa 540
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgagaaatatgggaagtattggttttgaagtaatgaataatgttagatacaaacatagaa 740
Query: 541 attctaatttttagaactagtatacacactccctgtaatatacctacttacagtcaatct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 attctaatttttagaactagtatacacactccctgtaatatacctacttacagtcaatct 800
Query: 601 ttccatcaaatttttt-ctctcagcaaaatatcttcccatcatcaatatcactggttcat 659
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ttccatcaaatttttttctctcagcaaaatatcttcccatcatcaatatcactggttcat 860
Query: 660 tttattatt 668
|||||||||
Sbjct: 861 tttattatt 869
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1069
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1059
Effective search space: 696822
Effective search space used: 696822
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
