Query= MSMg01no276_i06.b1 MSMg01no276_i06.b1 CHROMAT_FILE:
MSMg01no276_i06.b1 PHD_FILE: MSMg01no276_i06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:28 2005
(317 letters)
>mm_chrX_110300841_110301557
Length = 717
Score = 590 bits (305), Expect = e-173
Identities = 311/313 (99%)
Strand = Plus / Plus
Query: 5 gaattcaacaaatatttcctgaactaaaattaataatgacttttttaacagatagtgaga 64
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 205 gaattcaacaaatatttcctgaactaaaattaataatgacttctttaacagatagtgaga 264
Query: 65 taaagacaaactatatcaatttaccttgatatctacctgctactttaaaagtcgttttta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taaagacaaactatatcaatttaccttgatatctacctgctactttaaaagtcgttttta 324
Query: 125 tttgcctggtataattgtcatctctgaagcttactgctcaataagattaccctttctagt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttgcctggtataattgtcatctctgaagcttactgctcaataagattaccctttctagt 384
Query: 185 tctttctgaatctggctggctggttcaactcagctgttctcgctcaaattgctctccaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tctttctgaatctggctggctggttcaactcagctgttctcgctcaaattgctctccaag 444
Query: 245 ctgactgtttcaatatggtttctctcaacttctcctcactgaattgctctgtttggcctc 304
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctgactgtttcaatacggtttctctcaacttctcctcactgaattgctctgtttggcctc 504
Query: 305 aagctaacactgg 317
|||||||||||||
Sbjct: 505 aagctaacactgg 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no276_i06.g1 MSMg01no276_i06.g1 CHROMAT_FILE:
MSMg01no276_i06.g1 PHD_FILE: MSMg01no276_i06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:28 2005
(370 letters)
>mm_chrX_110453281_110454050
Length = 770
Score = 687 bits (355), Expect = 0.0
Identities = 366/370 (98%), Gaps = 1/370 (0%)
Strand = Plus / Minus
Query: 1 gtttacatttgtaaacaatcaggaaaaaatgtgagaaatgaaaagaatattttcagacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gtttacatttgtaaacaatcaggaaaaaatgtgagaaatgaaaagaatattttcagacta 350
Query: 61 aaactataaaaccataaaaagaaaataatttgctattatagaatgacttttagtcttcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 aaactataaaaccataaaaagaaaataatttgctattatagaatgacttttagtcttcaa 290
Query: 121 ctttaaaaagaatcaactagtttcatgcatcaaaaataccacaacttataaatatatatt 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 289 ctttaaaaagaatcaactagtttcatgcatcaaaaataccacaacttctaaatatatatt 230
Query: 181 ggatacatcttaaaataatacgattaaagataattaaattataaattcattataaaacac 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 ggatacatcgtaaaataatacgattaaagataattaaattataaattcattataaaacac 170
Query: 241 tcatatttgttaaatatttttctcagtctaaactactcaagatgcaaattaataaaaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 tcatatttgttaaatatttttctcagtctaaactactcaagatgcaaattaataaaaata 110
Query: 301 tcactgcaaataanataatcaattattacatgcatgaaatacaaaaaaaatatttttgtc 360
||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 109 tcactgcaaataaaataatcaattattacatgcatgaaatac-aaaaaaatatttttgtc 51
Query: 361 atacacagtt 370
||||||||||
Sbjct: 50 atacacagtt 41
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
