TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCCTCACCTCAACCACCAAGACCTAGGAATTTCAAATGTACACCTAA
GAAAAAGTTTTTCTCCCAAACCTACTTAACTTTCTTTCCTTCTTCTAATA
TATATATATATATATATATATATATATATATATATATATATATATATATA
TATATATATATATAGAGAGTTAGGGAGAGGGGGGGAGTAGAGGTATATAC
ACAAAAGAGCTCGGGGGGGGGTATGCGCGAGTGCGCGCGCGGGCTCTCGG
GGAGGGGTCTAGTGGGCCTTATCTTCCTACGCACGGGGGGGCCCGAGAGA
GGGTGGAGAGCGAGAAAAGAGCCAACTCTTCAAAGACTTACCCCACCTCT
CCTCCCGAGTTTGTGTGTAGACCCGGAGACGTGTCGCGCGAGAGAGAGCG
GGAAACATCTAGAGGTTTCTGTGAGCGTAAGAGTGCTTCACCTCTTTCCA
ATCTCTGATTTTGTGAGTAAGCCAGAGTGGGGGTGTGTGAGTGTGTGTGC
ATGGCTTCGAGGGTGTGCGCCAGAGATACCGAGAGAGAGCGAGGTGGGAC
GCTGGTGTGCTATTAAAAAAAAAAAAAAAATACGAGAGGGTGTGGGTGGG
TGCTCGTGGGCTCTGAGGACTCACTCTCTCTCTCTCTCGCCTTCACACCC
GAGTGCGTGTGTTGGTGAACAGCCTCTCGCCCGCG

CCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCTTGTCAGTTTTAAATTTGATTCC
TAAACCCTCTGTCATGAAACTTTTAATATTATCTCAACCAACTTGAGGTA
ACTGAACCCAGCAAGTTTGAACTTCACAAGAACAAGAAGTAAAGTTCTGT
TTCAGGCAAAATATGTGTTTGTATTTATATGTTCTATAAGCTAGGGTTAA
CTCAATCAAAACATGCCCCTCCTGAGAAAAGTTGTTTGGCTTGTCTACAC
CTCAGGTAAGGTTTGGTCTTGTAATCACAACACTCTGAAGGTCTAGGTAA
GAGATTGCAAGTTCAAGCCAGCCTGGGCCACCTTGCAAAATTTTGTATCA
AAAAATTTCACAACAAAAGCTGTGACAATAACTGAGTTCCTTAAAAACCT
TTGGAACTCATATATGTATTATCTTTGTATACATGTAATAATTATTCATG
AGATCTTCCATATAGTAAGAATTTATTAATATCTCTTTTAAAATGGCAAA
TATCTGAATTTTAAGAAGTGTCAATTTCTTAAGGAGTTTGAAGAATCATT
CATGTATTAAGGCCTAAATTGTGGTTTATTGACAAATGGACAAGCTGATT
TCCAGACTGGTTGTACCAGCTTTCAATCCCACCAGCAATGTGTTGCTCTT
TTTCCACATCCTGGCCAGCATCTGCTGTCACCTGA

Query= MSMg01no280_k01.g1 MSMg01no280_k01.g1 CHROMAT_FILE:
MSMg01no280_k01.g1 PHD_FILE: MSMg01no280_k01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:31 2005
         (660 letters)



>mm_chrX_14550022_14551081
          Length = 1060

 Score = 1253 bits (648), Expect = 0.0
 Identities = 657/660 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcttgtcagttttaaatttgattcctaaaccctctgtcatgaaacttttaatattatctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttgtcagttttaaatttgattcctaaaccctctgtcatgaaacttttaatattatctc 260

                                                                       
Query: 61  aaccaacttgaggtaactgaacccagcaagtttgaacttcacaagaacaagaagtaaagt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaccaacttgaggtaactgaacccagcaagtttgaacttcacaagaacaagaagtaaagt 320

                                                                       
Query: 121 tctgtttcaggcaaaatatgtgtttgtatttatatgttctataagctagggttaactcaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctgtttcaggcaaaatatgtgtttgtatttatatgttctataagctagggttaactcaa 380

                                                                       
Query: 181 tcaaaacatgcccctcctgagaaaagttgtttggcttgtctacacctcaggtaaggtttg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaaaacatgcccctcctgagaaaagttgtttggcttgtctacacctcaggtaaggtttg 440

                                                                       
Query: 241 gtcttgtaatcacaacactctgaaggtctaggtaagagattgcaagttcaagccagcctg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtcttgtaatcacaacactctgaaggtctaggtaagagattgcaagttcaagccagcctg 500

                                                                       
Query: 301 ggccaccttgcaaaattttgtatcaaaaaatttcacaacaaaagctgtgacaataactga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggccaccttgcaaaattttgtatcaaaaaatttcacaacaaaagctgtgacaataactga 560

                                                                       
Query: 361 gttccttaaaaacctttggaactcatatatgtattatctttgtatacatgtaataattat 420
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 561 gttccttaaaaacctttggaactcatatatgtgttatctttgtatacatgtaataattat 620

                                                                       
Query: 421 tcatgagatcttccatatagtaagaatttattaatatctcttttaaaatggcaaatatct 480
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcatgagatcttccatatagtaaaaatttattaatatctcttttaaaatggcaaatatct 680

                                                                       
Query: 481 gaattttaagaagtgtcaatttcttaaggagtttgaagaatcattcatgtattaaggcct 540
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 681 gaattttaagaagtgtcaatttcttaaggagtttgaagagtcattcatgtattaaggcct 740

                                                                       
Query: 541 aaattgtggtttattgacaaatggacaagctgatttccagactggttgtaccagctttca 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaattgtggtttattgacaaatggacaagctgatttccagactggttgtaccagctttca 800

                                                                       
Query: 601 atcccaccagcaatgtgttgctctttttccacatcctggccagcatctgctgtcacctga 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 atcccaccagcaatgtgttgctctttttccacatcctggccagcatctgctgtcacctga 860


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1060
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1050
Effective search space:   682500
Effective search space used:   682500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)