Query= MSMg01no280_m06.b1 MSMg01no280_m06.b1 CHROMAT_FILE:
MSMg01no280_m06.b1 PHD_FILE: MSMg01no280_m06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:41 2005
(234 letters)
>mm_chrX_83592534_83593167
Length = 634
Score = 437 bits (226), Expect = e-127
Identities = 232/234 (99%)
Strand = Plus / Plus
Query: 1 agtttgggagaatataaaagcctcaggctatgattccttctgacctccactcgttagagg 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 201 agtttgggagaatataaaagcctcaggctatggttccttctgacctccactcgttagagg 260
Query: 61 gctaccttaaacctccaggtacctccttcatatggcttgctctgattcccaaatgctggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctaccttaaacctccaggtacctccttcatatggcttgctctgattcccaaatgctggg 320
Query: 121 cttagatactctgagcatcacagcattttaaggctcccattgattcgcaagcactggcct 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 cttagatactctgagcatcacagcattttaaggctcccactgattcgcaagcactggcct 380
Query: 181 tagctcctctaaacctccaagtatctcattcttatggaaccctctgactcctat 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagctcctctaaacctccaagtatctcattcttatggaaccctctgactcctat 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no280_m06.g1 MSMg01no280_m06.g1 CHROMAT_FILE:
MSMg01no280_m06.g1 PHD_FILE: MSMg01no280_m06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:41 2005
(291 letters)
>mm_chrX_83748629_83749321
Length = 693
Score = 507 bits (262), Expect = e-148
Identities = 284/292 (97%), Gaps = 2/292 (0%)
Strand = Plus / Minus
Query: 1 aagatgtataccaagctggccttgaactcacaggaatatacctgtttctccctccagagc 60
||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 575 aagatgtataccaagctggccttgaactcacaggaatatacctgtctctacctccagagc 516
Query: 61 tctgggattaaatgactgagccaaggctccagttgactgtttttaatattgtttatccaa 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 515 tctgggattaaatgactgagccaaggctccagttgactatttttaatattgtttatccaa 456
Query: 121 gagtggaaattattatggctttgacaggaaccaattttcagcatggagtctggattcgaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 455 gagtggaaattattatggctttgacaggaaccaattttcagcatggagtctggattcgca 396
Query: 181 tctgatgtttcattcatgtactccctccctgtttgtattctgagacttttgtcttttcac 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 395 tctgatgtttcattcatgtactccctccctgtttgtagtctgagacttttgtcttttcac 336
Query: 241 atgcacagtatggatcatagctacttctttttttt--ggggggggggttcga 290
|||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 335 atgcacagtagggatcatagctacttcttttttttttggggggggggttcga 284
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 693
Length adjustment: 9
Effective length of query: 282
Effective length of database: 684
Effective search space: 192888
Effective search space used: 192888
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
