Query= MSMg01no291_p05.b1 MSMg01no291_p05.b1 CHROMAT_FILE:
MSMg01no291_p05.b1 PHD_FILE: MSMg01no291_p05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:52 2005
(510 letters)
>mm_chrX_5802071_5802980
Length = 910
Score = 601 bits (311), Expect = e-176
Identities = 326/331 (98%)
Strand = Plus / Minus
Query: 1 gctaaagcaaacttgaaaaagtgtagcagaaagattgcaagagccttaagacctaaaagc 60
||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||
Sbjct: 331 gctaaagcaaacttgaaaaagtgtagcagaaagattgtaagagccagaagatttaaaagc 272
Query: 61 aatatcatcttctagataggaaagctgcattaatgaaatctcaacagtatgcttgccaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 aatatcatcttctagataggaaagctgcattaatgaaatctcaacagtatgcttgccaca 212
Query: 121 acatctgggcaggtctctttgaccaccatgggaacagaataaagagtccacggagacaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 acatctgggcaggtctctttgaccaccatgggaacagaataaagagtccacggagacaag 152
Query: 181 aaggcagtttggttcagcataactaaataggcaatgttggctcaaactttaggagtttga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 aaggcagtttggttcagcataactaaataggcaatgttggctcaaactttaggagtttga 92
Query: 241 ccctgagacgtttattttaggcatattttagcacagcacaatttggtgaaaactttcctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 ccctgagacgtttattttaggcatattttagcacagcacaatttggtgaaaactttcctg 32
Query: 301 gtgataattaactcagtcctgagtgcataat 331
|||||||||||||||||||||||||||||||
Sbjct: 31 gtgataattaactcagtcctgagtgcataat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 910
Length adjustment: 10
Effective length of query: 500
Effective length of database: 900
Effective search space: 450000
Effective search space used: 450000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no291_p05.g1 MSMg01no291_p05.g1 CHROMAT_FILE:
MSMg01no291_p05.g1 PHD_FILE: MSMg01no291_p05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:52 2005
(194 letters)
>mm_chrX_5631661_5632253
Length = 593
Score = 346 bits (179), Expect = e-100
Identities = 191/195 (97%), Gaps = 3/195 (1%)
Strand = Plus / Plus
Query: 1 aaaactgtattccttagaagttacttggaggccaactctcccttttagaatctatgtatg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 aaaactgtattccttagaagttacttggaggccaactctcccttttagaatctacgtatg 260
Query: 61 gatggctggtcagaataagaattcacaacacagaaatataagcctattcttttttttttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatggctggtcagaataagaattcacaacacagaaatataagcctattcttttttttttt 320
Query: 121 tctcagctgaaattttatttttgctttcagttcttatctatgtgctttagaaaat-tggc 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 321 -ctcagctgaaattttatttttgctttcagttcttatctatgtgctttagaaaatatg-c 378
Query: 180 tctggaccaattccc 194
|||||||||||||||
Sbjct: 379 tctggaccaattccc 393
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 593
Length adjustment: 8
Effective length of query: 186
Effective length of database: 585
Effective search space: 108810
Effective search space used: 108810
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
