Query= MSMg01no292_p02.b1 MSMg01no292_p02.b1 CHROMAT_FILE:
MSMg01no292_p02.b1 PHD_FILE: MSMg01no292_p02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:10 2005
(177 letters)
>mm_chrX_151740222_151740798
Length = 577
Score = 290 bits (150), Expect = 3e-83
Identities = 170/177 (96%)
Strand = Plus / Plus
Query: 1 gaaacaccagnaccttattaacaaggtccaagtaacactggtaccgtggcctgacgctgg 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 gaaacaccagtaccttattaacaaggtccaagtaacactggtaccgtggcctgacgctgg 148
Query: 61 agatgaggagactcgtcttccttagcggcaacagtaatggaggcgaagtaacatttttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 149 agatgaggagactcgtcttccttagcggcaacagtaatggaggcgaagtaacagtcacta 208
Query: 121 agagtgggtacttccggtctgtgatatacttggtacggcggcctgacgctggagatg 177
|||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 209 agagtgggtacttccggtctgtgatatacttggtacggtggcctgtcgctggagatg 265
Score = 184 bits (95), Expect = 3e-51
Identities = 128/143 (89%), Gaps = 8/143 (5%)
Strand = Plus / Plus
Query: 39 tggtaccgtggcctgacgctggagatgaggagactcgtcttccttagcggcaacagtaat 98
|||||| |||||||| |||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 239 tggtacggtggcctgtcgctggagatgaggagactcaccttccttagcagcaacagtaat 298
Query: 99 ggaggcgaagtaac----attttttaagagtgggtacttccggtctgtgatatacttggt 154
|||||||||||||| | | |||||||||||||||||||||||||||||||||||
Sbjct: 299 ggaggcgaagtaacggtcact----aagagtgggtacttccggtctgtgatatacttggt 354
Query: 155 acggcggcctgacgctggagatg 177
|||| ||||||||||||||||||
Sbjct: 355 acggtggcctgacgctggagatg 377
Score = 149 bits (77), Expect = 9e-41
Identities = 101/113 (89%), Gaps = 8/113 (7%)
Strand = Plus / Plus
Query: 39 tggtaccgtggcctgacgctggagatgaggagactcgtcttccttagcggcaacagtaat 98
|||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 351 tggtacggtggcctgacgctggagatgaggagactcgtcttccttagcggcagcagcaat 410
Query: 99 ggaggcgaagtaac----attttttaagagtgggtacttccggtctgtgatat 147
|||||||||||||| | | ||||||||||||||||||||||||||||
Sbjct: 411 ggaggcgaagtaacggtcact----aagagtgggtacttccggtctgtgatat 459
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 3
Length of query: 177
Length of database: 577
Length adjustment: 8
Effective length of query: 169
Effective length of database: 569
Effective search space: 96161
Effective search space used: 96161
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
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