Query= MSMg01no294_b15.b1 MSMg01no294_b15.b1 CHROMAT_FILE:
MSMg01no294_b15.b1 PHD_FILE: MSMg01no294_b15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:42 2005
(318 letters)
>mm_chrX_64823899_64824616
Length = 718
Score = 586 bits (303), Expect = e-172
Identities = 315/325 (96%), Gaps = 10/325 (3%)
Strand = Plus / Plus
Query: 4 ggaattcacatttcttttctagaaatagaatatcatacaagactcctttggagcagtttt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcacatttcttttctagaaatagaatatcatacaagactcctttggagcagtttt 263
Query: 64 cttttatgtttgtttcttgcctattcaaatatcactgaaagtaggtagattcaaataatt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cttttatgtttgtttcttgcctattcaaatatcactgaaagtaggtagattcaaataatt 323
Query: 124 atagtttcacttgcttcaatcaccatataagctttaaaaagtatataatatttatatttg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atagtttcacttgcttcaatcaccatataagctttaaaaagtatataatatttatatttg 383
Query: 184 taata----------tttttatctatcttctttaattttttcaagatgtgtaatatttat 233
||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 taataatttgtaatatttttatctatcttctttaattttttcaagatgtgtaatatttat 443
Query: 234 tttgataaagactacattttcaaaatagaaagtgattgtgagtgtttactatacagttgt 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tttgataaagactacattttcaaaatagaaagtgattgtgagtgtttactatacagttgt 503
Query: 294 tttgtttgtttgtttttttgtttgt 318
|||||||||||||||||||||||||
Sbjct: 504 tttgtttgtttgtttttttgtttgt 528
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no294_b15.g1 MSMg01no294_b15.g1 CHROMAT_FILE:
MSMg01no294_b15.g1 PHD_FILE: MSMg01no294_b15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:42 2005
(234 letters)
>mm_chrX_65011146_65011779
Length = 634
Score = 445 bits (230), Expect = e-129
Identities = 233/234 (99%)
Strand = Plus / Minus
Query: 1 acacttaatatcctgaatatttatataaaatatatcatagactcccttattaacgtttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 acacttaatatcctgaatatttatataaaatatatcatagactcccttattaacgtttaa 375
Query: 61 caaaattatcatgagagccattcaatttagaagtcagctaatcactattaacgagggtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 caaaattatcatgagagccattcaatttagaagtcagctaatcactattaacgagggtta 315
Query: 121 attatgcaccatcattaccttttattagaaataaaattttatttgaacatacccacgtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 314 attatgcaccatcattaccttttattagaaataaaattttatttgaacatacccatgtct 255
Query: 181 acttatttacacattctctattgctaaacaaccaagacttgtattacatacaaa 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 acttatttacacattctctattgctaaacaaccaagacttgtattacatacaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
