Query= MSMg01no294_o19.b1 MSMg01no294_o19.b1 CHROMAT_FILE:
MSMg01no294_o19.b1 PHD_FILE: MSMg01no294_o19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:42 2005
(234 letters)
>mm_chrX_136339163_136339796
Length = 634
Score = 445 bits (230), Expect = e-129
Identities = 233/234 (99%)
Strand = Plus / Minus
Query: 1 gagataataaaagcagttaacagggtttgaagggccccatgagactataaggagtcagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gagataataaaagcagttaacagggtttgaagggccccatgagactataaggagtcagta 305
Query: 61 aactttgcagagtaagggttaccaaaatgctacccatgcactgaaagaaggctatcagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 aactttgcagagtaagggttaccaaaatgctacccatgcactgaaagaaggctatcagaa 245
Query: 121 gagggactaagtagaggaggacaagatggagaactacacagttgctccctccatccctcc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 244 gagggactaagtagaggaggacaagatggagaactacacagttgctccctccatccttcc 185
Query: 181 ttccttccctcactacccccctctccatttgttgaatatcttgcctattcagtt 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ttccttccctcactacccccctctccatttgttgaatatcttgcctattcagtt 131
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no294_o19.g1 MSMg01no294_o19.g1 CHROMAT_FILE:
MSMg01no294_o19.g1 PHD_FILE: MSMg01no294_o19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:42 2005
(289 letters)
>mm_chrX_136219781_136220468
Length = 688
Score = 518 bits (268), Expect = e-151
Identities = 283/288 (98%), Gaps = 1/288 (0%)
Strand = Plus / Plus
Query: 1 tgctcccgccaccacctttcctctgctaccaccgcgtcctgactgtcttgcacaggactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgctcccgccaccacctttcctctgctaccaccgcgtcctgactgtcttgcacaggactc 260
Query: 61 ccagttgctctttgggtcttaccgcgataggagaagctaagggggaatccagtacctgat 120
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 ccagttgctctttgggtcttaccgcgataggagaagctaagggggtttccagtacctgat 320
Query: 121 gggtcgcttcccatggcgaagggggctgatgggcagtgcagtgcgctagctagactagtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggtcgcttcccatggcgaagggggctgatgggcagtgcagtgcgctagctagactagtc 380
Query: 181 ccgttaagacaggcgaggagagcgggttcgcgagtgtggacttaactttttttccaaaaa 240
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 ccgttaagacaggcgaggagagcgggttcgcgggtgtggacttaactttttttccaaaa- 439
Query: 241 cctatacaaataatcatcaccctagggagtgagtgcgagtgtgtgagg 288
|||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 440 cctatacaaataatcaccaccctagggagtgagtgcgagtgtgtgagg 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 688
Length adjustment: 9
Effective length of query: 280
Effective length of database: 679
Effective search space: 190120
Effective search space used: 190120
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
