TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTTTGTTTAGCTCTCTACCCCATTTATTAATGGGGTTATTTGATTTTCTG
GAGCCCACCTTCTTGAGTTCTTTATATATATTAGATATTAGTCCCCTATC
TGATTAGGATAGGTAAAGATCCTTTCCCAATCCAAAGGCACACTTAATGC
CTAGCCTGATGACCCTTTGGTTCCTGCTCTGCTCTCTGTGTTTGTATGAG
CTTTGCTCAGCTGTTTTCGAGGGCCTTGTTCTCCTTGTGTCATGCATGTC
CTGTCTCACCAACTGCTTGAGCTTCTTCTGGGTTCTCTGAGTTCTGAAGA
GAGAGATTTGATGGAGACACTTCATTAGTAATGAGTGTTCTCTGCATAAT
GTTCGACTATGGATCTTTGTGTTTGTTCCCACCTGCTACATGACGATGCA
TTTCTGATGGTGGCTGGATAAGGTGCTGATCTATGAGTATAGCACAATAT
CACATGGAGTCATTTTATTGTTTCATTTTTTTCAGACCCATACATTTAGT
TTTACTATAGGTCCCTAGGCTATCAAGACTCTGTCTGGTTCTTGATCTTC
CAAGCAGTGTCATATATGGATTCTATCTCATGAAGTGCGCCTTAAGTCAA
ATCAGACATTGGTTGGCTACTCCCACAAGCTTCTTATCACCATTACCCTA
GCATATTTTGCAGGCAGGACAAN

GACTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTTTGACCCCCATTTTTAAA
ATAGGGTTATTTGATTTTCTGGAGTCCATCTTCTTGAGTTCTTTATATAT
ATTGGATATTAGTCTCCTATCTGATTTAGGATTGGTAAAGATCCTTTCCC
AATCTGTTGGTGAGAAACTTTGCCAACACCTCAATATGAGTCAACTAACT
TTAAATGTATAAGGTGATTTTGCAGATATAAAATTAATGTATGGTGTATA
TCATTATCACTTTACCTTCTTGACTTAAGTTACTTGGGAAACTTTATTTT
TAGAATCTATCTTGTAATTTTTTTCTTGTAAAATATGGAGTATTGTTGAC
TTAAGAACTTTAATTATAGTACTAAAGAAAAGTGCAATAATAATTTCTTT
CCCAATTTTTCAATAAAGTATCTTGTGTATGATATCAAGTTAAATGATTT
ATTTCATAATTTTTTATAGTTCAAAGTTTGATATAGAGAAAGTAATTATA
AAATTTCCACAGTAATTACAAACTAGTTCAGGTAAGAATTTACAATTCTT
GTCTGTGCTTTCAAAAGCAGAAATGCTGCATCTTGCTCTTCCAAGCACAC
ATATATATATATATTCCACAGATACTAATTTAGTATGGAAAAATCAGCAG
CTATTGTTTTTTACAGAATGTGATTTA

Query= MSMg01no299_j04.g1 MSMg01no299_j04.g1 CHROMAT_FILE:
MSMg01no299_j04.g1 PHD_FILE: MSMg01no299_j04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:32 2005
         (638 letters)



>mm_chrX_154997568_154998601
          Length = 1034

 Score =  951 bits (492), Expect = 0.0
 Identities = 510/518 (98%), Gaps = 4/518 (0%)
 Strand = Plus / Minus

                                                                       
Query: 121 tcctttcccaatctgttggtgagaaactttgccaacacctcaatatgagtcaactaactt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 tcctttcccaatctgttggtgagaaactttgccaacacctcaatatgagtcaactaactt 796

                                                                       
Query: 181 taaatgtataaggtgattttgcagatataaaattaatgtatggtgtatatcattatcact 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 taaatgtataaggtgattttgcagatataaaattaatgtatggtgtatatcattatcact 736

                                                                       
Query: 241 ttaccttcttgacttaagttacttgggaaactttatttttagaatctatcttgtaatttt 300
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 735 ttaccttcttgacttaagttacttgggaaactttatttttagaatctaacttgtaatttt 676

                                                                       
Query: 301 tttcttgtaaaatatggagtattgttgacttaagaactttaattatagtactaaagaaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tttcttgtaaaatatggagtattgttgacttaagaactttaattatagtactaaagaaaa 616

                                                                       
Query: 361 gtgcaataataatttctttcccaatttttcaataaagtatcttgtgtatgatatcaagtt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gtgcaataataatttctttcccaatttttcaataaagtatcttgtgtatgatatcaagtt 556

                                                                       
Query: 421 aaatgatttatttcataattttttatagttcaaagtttgatatagagaaagtaattataa 480
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 555 aaatgatttatttcataattttttatagttcaaagtttgatatagagaaagtaattgtaa 496

                                                                       
Query: 481 aatttccacagtaattacaaactagttcaggtaagaatttacaattcttgtctgtgcttt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aatttccacagtaattacaaactagttcaggtaagaatttacaattcttgtctgtgcttt 436

                                                                       
Query: 541 caaaagcagaaatgctgcatcttgctcttccaagcacacatatatatatatattccacag 600
           |||||||||||||||||||||||||||||||||||||||| ||||||||    |||||||
Sbjct: 435 caaaagcagaaatgctgcatcttgctcttccaagcacacacatatatat----tccacag 380

                                                 
Query: 601 atactaatttagtatggaaaaatcagcagctattgttt 638
           ||||||||||||||||| ||||||||||||||||||||
Sbjct: 379 atactaatttagtatggcaaaatcagcagctattgttt 342


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1034
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1024
Effective search space:   643072
Effective search space used:   643072
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)