Query= MSMg01no301_p10.b1 MSMg01no301_p10.b1 CHROMAT_FILE:
MSMg01no301_p10.b1 PHD_FILE: MSMg01no301_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:29 2005
(614 letters)
>mm_chrX_156627526_156628539
Length = 1014
Score = 1149 bits (594), Expect = 0.0
Identities = 606/610 (99%)
Strand = Plus / Plus
Query: 4 ggaattcctactcttccggctcacagggggttgcaaagctactaactggaagcaatgatt 63
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctactcttatggctcacagggggttgcaaagctactaactggaagcaatgatt 263
Query: 64 tttcgattatgagaaaagagccaaacgatgcttcatgcgattgataatattgtcacttgg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttcgattatgagaaaagagccaaacgatgcttcatgcgattgataatattgtcacttgg 323
Query: 124 agaggatcaagactcaactaggagagaaaccgttgggcatgtttatgaggtatttattcc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agaggatcaagactcaactaggagagaaaccgttgggcatgtttatgaggtatttattcc 383
Query: 184 tcagcaagaccccatgtatactaggttagtgtggcttgctggatggtgttgtgtaagaaa 243
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcagcaagaccccgtgtatactaggttagtgtggcttgctggatggtgttgtgtaagaaa 443
Query: 244 caaccccttggagatggcagcttcccttttggttttttgttttcttttgttttgctttgc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 caaccccttggagatggcagcttcccttttggttttttgttttcttttgttttgctttgc 503
Query: 304 tttgtttaacactttcagggttgcttagggttgtatcaggttcctgatatacgtagctgc 363
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tttgttttacactttcagggttgcttagggttgtatcaggttcctgatatacgtagctgc 563
Query: 364 gtggggtcatgttctctttcctctaaattctgataagactctataaatcacgcctttatt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gtggggtcatgttctctttcctctaaattctgataagactctataaatcacgcctttatt 623
Query: 424 atgttttcctcaaacagcacagatggagtgtgctatttgtctctggctgggatcttgata 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atgttttcctcaaacagcacagatggagtgtgctatttgtctctggctgggatcttgata 683
Query: 484 gtggttgttccgtgagaatggttggttgatctcactgaggtactggatagtaaagaccaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gtggttgttccgtgagaatggttggttgatctcactgaggtactggatagtaaagaccaa 743
Query: 544 ggtggccaatgtatcaaaccaacctggatgtggtgactcagacagctgcattctgcttta 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ggtggccaatgtatcaaaccaacctggatgtggtgactcagacagctgcattctgcttta 803
Query: 604 ggagggaaga 613
||||||||||
Sbjct: 804 ggagggaaga 813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space: 606416
Effective search space used: 606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no301_p10.g1 MSMg01no301_p10.g1 CHROMAT_FILE:
MSMg01no301_p10.g1 PHD_FILE: MSMg01no301_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:29 2005
(553 letters)
>mm_chrX_156789243_156790201
Length = 959
Score = 961 bits (497), Expect = 0.0
Identities = 525/537 (97%), Gaps = 6/537 (1%)
Strand = Plus / Minus
Query: 1 ttctccacatgggttttaccttgctgaaggctggtatggtgtggtcccagggtttctgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916 ttctccacatgggttttaccttgctgaaggctggtatggtgtggtcccagggtttctgga 857
Query: 61 aaacctccaccaatgaatagcctttatgcttgatcactcacagagaaaagcaaaggggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 aaacctccaccaatgaatagcctttatgcttgatcactcacagagaaaagcaaaggggaa 797
Query: 121 ggaggaggggtagaaaaaggaaatgggcccagaaatggagaaagaagcaaaaagaaaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 ggaggaggggtagaaaaaggaaatgggcccagaaatggagaaagaagcaaaaagaaaaga 737
Query: 181 ttgttctcactcagctagcacagggaaggtcgcctgtcagag----ctgtcagatcattg 236
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 736 ttgttctcactcagctagcacagggaaggtcgcctgtcagagctgtctgtcagatcattg 677
Query: 237 ttggtaattaaaatgtaaactctcattgggctccaaaatcatctggtccccctgcagcac 296
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 676 ttggtaattaaaatataaactctcattgggctccaaaatcatctggtccctctgcagcac 617
Query: 297 tcaaaggggatgcatgtaaacccttagaggtgtatgtcttacatatttgctccagcactt 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tcaaaggggatgcatgtaaacccttagaggtgtatgtcttacatatttgctccagcactt 557
Query: 357 ctgttgagaaaatatcttcagcctgtgaagaaactagatttttgaaaagtggcctgggca 416
|||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 556 ctgttgagaaaatatcttcaacccatgaagaaactagatttttgaaaagtggcctgggca 497
Query: 417 tgaaggctgatgcctctaattcaagcaattgttagggtaaaacaaagggattgctccaat 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tgaaggctgatgcctctaattcaagcaattgttagggtaaaacaaagggattgctccaat 437
Query: 477 cttgaggcc--ccaggactgcagggtaagagcctgtcaagctagagatggggggggg 531
||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 436 cttgaggccaaccaggactgcagggttagagcctgtcaagctagagatggggggggg 380
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 959
Length adjustment: 10
Effective length of query: 543
Effective length of database: 949
Effective search space: 515307
Effective search space used: 515307
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
