Query= MSMg01no302_l10.b1 MSMg01no302_l10.b1 CHROMAT_FILE:
MSMg01no302_l10.b1 PHD_FILE: MSMg01no302_l10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:25 2005
(634 letters)
>mm_chrX_157961980_157963013
Length = 1034
Score = 1104 bits (571), Expect = 0.0
Identities = 577/579 (99%)
Strand = Plus / Minus
Query: 56 tagcaacaaagcggccacagacaatctataaatggcatggttgtgttcttatcaaactat 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1034 tagcaacaaagcggccacagacaatctataaatggcatggttgtgttcttatcaaactat 975
Query: 116 ttaaggacattaaaatatgaatttcaggtagtttctacgtatcaacaaaaacttgcctct 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 974 ttaaggacattaaaatatgaatttcaggtagtttctacgtatcaacaaaaacttgcctct 915
Query: 176 ccctccaatgattcaaaatgtaaaacccattctttgtttgccagaactataaaaccaaga 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 ccctccaatgattcaaaatgtaaaacccattctttgtttgccagaactataaaaccaaga 855
Query: 236 ggctgccaggcatggcccacctaccattgtcagttgctttccttgttgtaggtaccaccc 295
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 ggctgccagacatggcccacctaccattgtcagttgctttccttgttgtaggtaccaccc 795
Query: 296 acgacgaggaaaatggaacacttcctttgcctccttgagaaaatgtcaacttaaagataa 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 acgacgaggaaaatggaacacttcctttgcctccttgagaaaatgtcaacttaaagataa 735
Query: 356 aacacaaatttccgtaatctctaacttatcttgtatcgtctctctaaactcaggtatgtt 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 734 aacacaaatttccgtaatctctaacttatcttgtatcgtctctctaaactcaggtatatt 675
Query: 416 attatacacatggctataatcacttcttattgcatttcttaaaagcaagcaagtacggtg 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 attatacacatggctataatcacttcttattgcatttcttaaaagcaagcaagtacggtg 615
Query: 476 gccaatatacaaaaacggttttcaaaatatgactctataaccttgtgcaatatctagctt 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 gccaatatacaaaaacggttttcaaaatatgactctataaccttgtgcaatatctagctt 555
Query: 536 caaattgccaatattgcaagccactttgcaatttcatcaaacaagcagaaacaatttgat 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 caaattgccaatattgcaagccactttgcaatttcatcaaacaagcagaaacaatttgat 495
Query: 596 gggactggaaagtggtgccttgccaaatgttgcctgaga 634
|||||||||||||||||||||||||||||||||||||||
Sbjct: 494 gggactggaaagtggtgccttgccaaatgttgcctgaga 456
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no302_l10.g1 MSMg01no302_l10.g1 CHROMAT_FILE:
MSMg01no302_l10.g1 PHD_FILE: MSMg01no302_l10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:25 2005
(453 letters)
>mm_chrX_157796528_157797378
Length = 851
Score = 808 bits (418), Expect = 0.0
Identities = 446/458 (97%), Gaps = 7/458 (1%)
Strand = Plus / Plus
Query: 1 aaacaaacaa-----acaacaacaacaacaacaacaacaacaaacaattgcgcagcttca 55
|||||||||| ||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 196 aaacaaacaacaacaacaacaacaacaacaacaacaacaacaaacaattg-g-agcttca 253
Query: 56 tataaataagattcatatcaaccaaaatactgacaaatgcaatttcttttgagggaacat 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tataaataagattcatatcaaccaaaatactgacaaatgcaatttcttttgagggaacat 313
Query: 116 gggtaaattttctaaacccaggttcattctccctaacttaatgcctttctttggtgcttt 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gggtaaattttctaaacccaggttcattctccctaacttaatgcctttctttggtgcttt 373
Query: 176 tttaaagtgtttatttttagaaggagcttaccttctatagtgatgtttttcctttgttta 235
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tttaaagcgtttatttttagaaggagcttaccttctatagtgatgtttttcctttgttta 433
Query: 236 aatggcacattccatagtttgggtgattttcttaggttctgtgaaattgaattattatgt 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 aatggcacattccatagtttgggtgattttcttaggttctgtgaaattgaattattatgt 493
Query: 296 aagtatatcaacctttttctgacccttgataaatttattaggctaatctcccagaattaa 355
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 494 aagtatatcaacctttttctgactcttgataaatttattaggctaatctcccagaattaa 553
Query: 356 gtcttcaggcccattgagatgcttctaaataattcactctcttgaatattaaatatatat 415
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 554 gtcttcaggcccattgagatgcttctaaataattcactctcttgaatattaaatgtatat 613
Query: 416 gattcaacatatgcactcctatatattagataatgact 453
||||||||||||| ||||||| ||||||||||||||||
Sbjct: 614 gattcaacatatgtactcctacatattagataatgact 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 851
Length adjustment: 10
Effective length of query: 443
Effective length of database: 841
Effective search space: 372563
Effective search space used: 372563
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
