Query= MSMg01no305_h13.b1 MSMg01no305_h13.b1 CHROMAT_FILE:
MSMg01no305_h13.b1 PHD_FILE: MSMg01no305_h13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:26 2005
(419 letters)
>mm_chrX_107868440_107869258
Length = 819
Score = 750 bits (388), Expect = 0.0
Identities = 400/404 (99%), Gaps = 1/404 (0%)
Strand = Plus / Minus
Query: 16 gaattccagaaagtatttaatttttaatttttatcttgacccattttttatttagtaaga 75
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 793 gaattccagaaagtatttaatttttaatttttatcttgaccca-tttttatttagtaaga 735
Query: 76 gttgttaaagttctctgagtttgtaatctttctgttgttcctgttgttgttgatatatag 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 gttgttaaagttctctgagtttgtaatctttctgttgttcctgttgttgttgatatatag 675
Query: 136 ctttagtccacggtaatccccagatgcagggaattatttcaattttcttatatctttatt 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ctttagtccacggtaatccccagatgcagggaattatttcaattttcttatatctttatt 615
Query: 196 ttttgtttgtatcagttcatgggggaaccttaaacagtgtagtttgatcaaatttattcc 255
|||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 614 ttttgtttgtatcagttcgtgggggaaccgtaaacagtgtagtttgatcaaatttattcc 555
Query: 256 attctacatcttctctcaaagccataccctcttttccacccacccaactttttgtataac 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 attctacatcttctctcaaagccataccctcttttccacccacccaactttttgtataac 495
Query: 316 attttagctaattatgtacagtttgtgttgcctatatgctttgatgtttggccttcttct 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 494 attttagctaattatgtacagtttgtgttgcctatatgctttgatgtttggcctttttct 435
Query: 376 gtggagttactggcttactatgggtccctattttaaagaaaact 419
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gtggagttactggcttactatgggtccctattttaaagaaaact 391
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space: 332100
Effective search space used: 332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_h13.g1 MSMg01no305_h13.g1 CHROMAT_FILE:
MSMg01no305_h13.g1 PHD_FILE: MSMg01no305_h13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:27 2005
(375 letters)
>mm_chrX_107826804_107827578
Length = 775
Score = 679 bits (351), Expect = 0.0
Identities = 366/371 (98%)
Strand = Plus / Plus
Query: 1 ctggctgttgatggctgctttggaggatgaactgcctttttgcaagaggtatctcctgta 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 ctggctgttgatggctgctttggaggatgaactgcctttttgcaagaggtatctcctgaa 260
Query: 61 aagctgtaatgctccagtagatgattccatatccatgcatatacaaatagcaccaagtag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagctgtaatgctccagtagatgattccatatccatgcatatacaaatagcaccaagtag 320
Query: 121 actcaggctgccatgtggatactgagcatttggatttgggagttagaagtgtggggatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actcaggctgccatgtggatactgagcatttggatttgggagttagaagtgtggggatat 380
Query: 181 agaaggaattgtaggaaagggaccaggggcagattgatcaaataacatcacatctaacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agaaggaattgtaggaaagggaccaggggcagattgatcaaataacatcacatctaacat 440
Query: 241 ataaatcaaacaaaatgggtaaaaggtctcataatttcctttaattatagaaaaaatgac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataaatcaaacaaaatgggtaaaaggtctcataatttcctttaattatagaaaaaatgac 500
Query: 301 aaaacattttcatggtttaacactgattatgtttttttaattgaggcactcatttttcct 360
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 501 aaaacattttcatggtttaacactgattatgtgtaaataattgaggcactcatttttcct 560
Query: 361 ccaaaaatccg 371
|||||||||||
Sbjct: 561 ccaaaaatccg 571
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 775
Length adjustment: 9
Effective length of query: 366
Effective length of database: 766
Effective search space: 280356
Effective search space used: 280356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
