Query= MSMg01no313_k23.b1 MSMg01no313_k23.b1 CHROMAT_FILE:
MSMg01no313_k23.b1 PHD_FILE: MSMg01no313_k23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:40 2005
(755 letters)
>mm_chrX_127131406_127132560
Length = 1155
Score = 1033 bits (534), Expect = 0.0
Identities = 548/556 (98%), Gaps = 6/556 (1%)
Strand = Plus / Minus
Query: 206 cctggacttgcctgaactgcccagttcttggaaacagagatttaggcctggtcgccttaa 265
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1155 cctggacttgcctgaactgcccagttcttggaaacagagatttaggcctggtctccttaa 1096
Query: 266 tttgaagcctgtaatcagcctagcctcagagcagggttagaagctactaaggatagactc 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1095 tttgaagcctgtaatcagcctagcctcagagcagggttagaagctactaaggatagactc 1036
Query: 326 ctcttttgaagtcaaaggttgtaaccttaactgctattttcttggta------acacaca 379
||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1035 ctcttttgaagtcaaaggttgtaaccttaactgctattttcttggtaacacacacacaca 976
Query: 380 cacacacacacacacacacagggaaacatcaaaattgcctctccttaagatttaaaatac 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975 cacacacacacacacacacagggaaacatcaaaattgcctctccttaagatttaaaatac 916
Query: 440 attatgacattatgaaatagaaaagatagagaggttcctgggcattgttgaggctcaagg 499
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 915 attatgacattatgaaataggaaagatagagaggttcctgggcattgttgaggctcaagg 856
Query: 500 agagaagctactttctcctagtcaaaagcataaaatgtgaaagctacttctgacactggg 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 agagaagctactttctcctagtcaaaagcataaaatgtgaaagctacttctgacactggg 796
Query: 560 caaagggcatgtcttttaaaactgaccaaaatactacatactattgtcccctctcttaaa 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 caaagggcatgtcttttaaaactgaccaaaatactacatactattgtcccctctcttaaa 736
Query: 620 agttcattcacctgatctgtcaattacatggacaggagaccacccatcagagtatacttg 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 agttcattcacctgatctgtcaattacatggacaggagaccacccatcagagtatacttg 676
Query: 680 atatggtaagtagatgtgaataaacaagtgttctgtgaaacgactgaaccagacctgtct 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 atatggtaagtagatgtgaataaacaagtgttctgtgaaacgactgaaccagacctgtct 616
Query: 740 atggatagaaagaatg 755
||||||||||||||||
Sbjct: 615 atggatagaaagaatg 600
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 755
Length of database: 1155
Length adjustment: 10
Effective length of query: 745
Effective length of database: 1145
Effective search space: 853025
Effective search space used: 853025
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no313_k23.g1 MSMg01no313_k23.g1 CHROMAT_FILE:
MSMg01no313_k23.g1 PHD_FILE: MSMg01no313_k23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:40 2005
(418 letters)
>mm_chrX_126955895_126956712
Length = 818
Score = 725 bits (375), Expect = 0.0
Identities = 378/379 (99%)
Strand = Plus / Plus
Query: 1 tattacttccttatggtcctaactttagtgcctacaaagaaatggttgcatgcccactgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tattacttccttatggtcctaactttagtgcctacaaagaaatggttgcatgcccactgg 260
Query: 61 ctacaaaccatatcttcatttttcagggaagaatctgtagcaacctttaagaaatgccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctacaaaccatatcttcatttttcagggaagaatctgtagcaacctttaagaaatgccat 320
Query: 121 attcctttacctgtaattttgcgttttatttcattgtatagtctttagatgaaagagatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attcctttacctgtaattttgcgttttatttcattgtatagtctttagatgaaagagatg 380
Query: 181 agaggaaaagactagctacaaagataagcacagaactacttttgcagagaaactattaca 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 381 agaggaaaagactagctacaaagataagcactgaactacttttgcagagaaactattaca 440
Query: 241 gtgaagatgatggactacagttataaatgggcaagttggagaaaggcatatggaaattag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgaagatgatggactacagttataaatgggcaagttggagaaaggcatatggaaattag 500
Query: 301 aagcagatgaggagaaggacatcaaataaaaaactaaaatatcagtgtcagcatagaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagcagatgaggagaaggacatcaaataaaaaactaaaatatcagtgtcagcatagaaaa 560
Query: 361 aagacagtgaggtagaaaa 379
|||||||||||||||||||
Sbjct: 561 aagacagtgaggtagaaaa 579
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
