Query= MSMg01no318_g09.b1 MSMg01no318_g09.b1 CHROMAT_FILE:
MSMg01no318_g09.b1 PHD_FILE: MSMg01no318_g09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:34 2005
(370 letters)
>mm_chrX_110800162_110800931
Length = 770
Score = 700 bits (362), Expect = 0.0
Identities = 365/366 (99%)
Strand = Plus / Minus
Query: 5 gaattcacttttcattcctgataactgacgtacttgtttggtaaagtgattctttccccc 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gaattcacttttcatttctgataactgacgtacttgtttggtaaagtgattctttccccc 511
Query: 65 ataattttctaatggcccttatggcacagggctgtagcacctgctccaattcaggactaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ataattttctaatggcccttatggcacagggctgtagcacctgctccaattcaggactaa 451
Query: 125 ttctacccttagccctcaacccctagcccattgctgcattttcagttcatggcaggctac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ttctacccttagccctcaacccctagcccattgctgcattttcagttcatggcaggctac 391
Query: 185 tgtttgcactatgagcatgctaaggagccaaaatctatttttttaaccgtaattgtggct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tgtttgcactatgagcatgctaaggagccaaaatctatttttttaaccgtaattgtggct 331
Query: 245 cagtgtccaggaaagatgggaaatgttttcattcttacatgattaggaaaaaagaatccc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 cagtgtccaggaaagatgggaaatgttttcattcttacatgattaggaaaaaagaatccc 271
Query: 305 attcaatgaaaagaaacatttcttttaactctacaaacacaagtcctttatatagtttac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 attcaatgaaaagaaacatttcttttaactctacaaacacaagtcctttatatagtttac 211
Query: 365 aattaa 370
||||||
Sbjct: 210 aattaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no318_g09.g1 MSMg01no318_g09.g1 CHROMAT_FILE:
MSMg01no318_g09.g1 PHD_FILE: MSMg01no318_g09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:34 2005
(344 letters)
>mm_chrX_110635664_110636406
Length = 743
Score = 654 bits (338), Expect = 0.0
Identities = 341/342 (99%), Gaps = 1/342 (0%)
Strand = Plus / Plus
Query: 1 tgtgatgtgctaaagaaagaacatatggaaatgtctttctctaaggtaccagtgagtatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgatgtgctaaagaaagaacatatggaaatgtctttctctaaggtaccagtgagtatg 260
Query: 61 gtattgtatattgcagtgtgcctactggcaccattgcaagttcagcaccctgggaaaggc 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtat-gtatattgcagtgtgcctactggcaccattgcaagttcagcaccctgggaaaggc 319
Query: 121 aatgctttcaaacacgaataattgatgaattgtatgtaatatgcaaatgtgaatgcataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aatgctttcaaacacgaataattgatgaattgtatgtaatatgcaaatgtgaatgcataa 379
Query: 181 atctcctgaatgacagcttaatttatgtgcgcttttaagaatgtgggattagattttaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atctcctgaatgacagcttaatttatgtgcgcttttaagaatgtgggattagattttaat 439
Query: 241 taaatatcttcaaaggcatcctgacttattctggttttgggcttctgtctttagaaagta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 taaatatcttcaaaggcatcctgacttattctggttttgggcttctgtctttagaaagta 499
Query: 301 gcatgtgaaggtttaaatcataatttttacatacactgtcca 342
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gcatgtgaaggtttaaatcataatttttacatacactgtcca 541
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 743
Length adjustment: 9
Effective length of query: 335
Effective length of database: 734
Effective search space: 245890
Effective search space used: 245890
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
