Query= MSMg01no321_d22.b1 MSMg01no321_d22.b1 CHROMAT_FILE:
MSMg01no321_d22.b1 PHD_FILE: MSMg01no321_d22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:56 2005
(673 letters)
>mm_chrX_38237140_38238212
Length = 1073
Score = 1261 bits (652), Expect = 0.0
Identities = 669/676 (98%), Gaps = 3/676 (0%)
Strand = Plus / Plus
Query: 1 tccattggttgagtttccttcataaatacacctttttaaaatctcacttaaaatgttact 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccattggttgagtttccatcataaatacacctttttaaaatctcacttaaaatgttact 260
Query: 61 attgtctattatggtgtactcttgataactgttggttactagtattattatgcagcctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attgtctattatggtgtactcttgataactgttggttactagtattattatgcagcctca 320
Query: 121 gactctcttgatgggatgtccaaaactttaacattgcaacataaccttattttctgcaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gactctcttgatgggatgtccaaaactttaacattgcaacataaccttattttctgcaga 380
Query: 181 tgtgtctaactacattcatagttgctgttggaaaaatttaagccataagccacaggttga 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 381 tgtgtctaactacattcatagttgctgttggaaaaatttaggccataagccacaggttga 440
Query: 241 acatgcctgatagttttcctttattacttagtaggccatgaccttagaaaatttctgtgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acatgcctgatagttttcctttattacttagtaggccatgaccttagaaaatttctgtgt 500
Query: 301 cttccccataatgagactgatcttaacaacttgcttccaaacgtggcccaattacgcaat 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 501 cttccccataatgagactgatcttaacaacttgcttccaaacgtggcccaattaggtaat 560
Query: 361 ttggaaagaatgaatgctggcaaatactatttcctgtccttcatgttctgtgcagaatag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttggaaagaatgaatgctggcaaatactatttcctgtccttcatgttctgtgcagaatag 620
Query: 421 tcatgtttacagttctaggaagcaaatggcatcttagaaagaatcttttagactcaaatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcatgtttacagttctaggaagcaaatggcatcttagaaagaatcttttagactcaaatc 680
Query: 481 aagccttcctttcctacgagggaactgattgcacattcactttaggggtcaacacaaagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aagccttcctttcctacgagggaactgattgcacattcactttaggggtcaacacaaagt 740
Query: 541 cctttcctcggttgtttcataaacaagcctgtccttcagtgatcaaactagcaggaatga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cctttcctcggttgtttcataaacaagcctgtccttcagtgatcaaactagcaggaatga 800
Query: 601 caacttgagcagcttttttttt---catgctggtagtattcaaacctactgcattcacct 657
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 801 caacttgagcagcttttttttttttcatgctggtagtattcaaacctactgcattcacct 860
Query: 658 ccatttcaagcttgtc 673
||||||||||||||||
Sbjct: 861 ccatttcaagcttgtc 876
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space: 704769
Effective search space used: 704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no321_d22.g1 MSMg01no321_d22.g1 CHROMAT_FILE:
MSMg01no321_d22.g1 PHD_FILE: MSMg01no321_d22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:56 2005
(248 letters)
>mm_chrX_38401435_38402082
Length = 648
Score = 453 bits (234), Expect = e-132
Identities = 246/252 (97%), Gaps = 4/252 (1%)
Strand = Plus / Minus
Query: 1 attacatagatttatagtaaagttatttttggttagcaccatgaacaagagcactggttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 337 attacatagatttatagtaaagttatttttggttagcaccatgaacaagagcaatggttt 278
Query: 61 gtgaaatagcaaaggctgtttggaaaccctaacaaattaaaatttataagcgtgtatgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gtgaaatagcaaaggctgtttggaaaccctaacaaattaaaatttataagcgtgtatgtg 218
Query: 121 gt----aaaaaaaaaaaaaaagtcatggtatgtgagatgcccgacttgccagcaagaaag 176
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 gtaaaaaaaaaaaaaaaaaaagtcatggtatgtgagatgcccgacttgccagcaagaaag 158
Query: 177 acaccacaacaggatctttctgcacacgtttattgggagagcattactgcaaaggtgaaa 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 157 acaccacaacaggatctttctgcacacgtttattgggagagcattactgcaaaggcgaaa 98
Query: 237 gaccccgaacca 248
||||||||||||
Sbjct: 97 gaccccgaacca 86
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
