Query= MSMg01no321_g21.b1 MSMg01no321_g21.b1 CHROMAT_FILE:
MSMg01no321_g21.b1 PHD_FILE: MSMg01no321_g21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:10 2005
(663 letters)
>mm_chrX_85488055_85489117
Length = 1063
Score = 1152 bits (596), Expect = 0.0
Identities = 644/660 (97%)
Strand = Plus / Plus
Query: 4 ggaattctatggctctgtcttctgatgctagaattacaaatacacattggtattctgctc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctatggctctgtcttctgatgctagaattacaaatacacattggtattctgctc 263
Query: 64 ctcttgtttgggtagcacccgcattaactgctgtgcatcttctcatccaatgatatttta 123
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctcttgtttgggtagcaagtgcattaactgctgtgcatcttctcatccaatgatatttta 323
Query: 124 agcctaaatcaaccaggcttataacatgtatagccatttctatacacgtttggcaggcca 183
||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 324 agcctaaattaactaggcttataacatgtatagccatttctataaacgtttggcaggcca 383
Query: 184 ctggaaagcaggtttgcatatccaatttatttctgttttaatttttaaatgtattctctc 243
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 384 ctggaaagcaggtttgcatatccaatttatttctgttttaatttttaaatttattctctc 443
Query: 244 acagtatgtacaaatatgcattcaccatccgcttacatttatattatatcctgactgcag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 acagtatgtacaaatatgcattcaccatccgcttacatttatattatatcctgactgcag 503
Query: 304 tttacaattcctactctctcccagtccttactggtcaccttccctttgactccacatcca 363
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tttccaattcctactctctcccagtccttactggtcaccttccctttgactccacatcca 563
Query: 364 cccctccattgctcctcacaaaacgtcagacctgccagggatatcatccaaacatgtcat 423
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cccctccattgctcttcagaaaacgtcagacctgccagggatatcatccaaacatgtcat 623
Query: 424 attaaggtgcactaagattaggcactttcccttacattaaggctggatgagacaacccag 483
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 attacggtgcactaagattaggcactttcccttacattaaggctggatgagacaacccag 683
Query: 484 taggaggaaatgggtacgtgaagcaggaaaaagcatcagaaacagccctcactaccacta 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 taggaggaaatgggtacgtgaagcaggaaaaagcatcagaaacagccctcactaccacta 743
Query: 544 ttaggagttcaaaaagaagactaagttacacaaccataatatatttttagagagtctatg 603
|||||| |||||||||||||||||||||||||||||||| |||| ||||||| |||||||
Sbjct: 744 ttaggacttcaaaaagaagactaagttacacaaccataacatatatttagagggtctatg 803
Query: 604 tcagacacatgcaggcacctgggttgtcagttcaatctctgtgagcatctatgaaccctg 663
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 804 tcagacacatgcaggcacctgggttgtcagttcaatctctgtgagcgtctatgaaccctg 863
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space: 687609
Effective search space used: 687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no321_g21.g1 MSMg01no321_g21.g1 CHROMAT_FILE:
MSMg01no321_g21.g1 PHD_FILE: MSMg01no321_g21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:10 2005
(244 letters)
>mm_chrX_85541342_85541985
Length = 644
Score = 451 bits (233), Expect = e-131
Identities = 242/245 (98%), Gaps = 2/245 (0%)
Strand = Plus / Minus
Query: 1 catctccagggatgctgatttaattgttctttggtaaagcctaggcatcacgatttctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 catctccagggatgctgatttaattgttctttggtaaagcctaggcatcacgatttctga 491
Query: 61 aatctcccctgatgattatagtgtgaaagcaaggctgaaaatcactacttcagactaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 aatctcccctgatgattatagtgtgaaagcaaggctgaaaatcactacttcagactaaaa 431
Query: 121 ttaggtcagaaatttgagaa-cnagcagagcaatgctagttaataagagtccccagagac 179
|||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||
Sbjct: 430 ttaggtcagaaatttgagaagc-agcagagcaatgctagttagtaagagtccccagagac 372
Query: 180 taaaagctgattgtgttatctgttctaaaaggagaaaatctctgtccaggaagattaggt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 taaaagctgattgtgttatctgttctaaaaggagaaaatctctgtccaggaagattaggt 312
Query: 240 cttct 244
|||||
Sbjct: 311 cttct 307
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
