CTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTGTTTCGCTCTGTACCCCACTTTTTAATGGGGTTATTTGAATTT
CTGGAGTCCAGCTTCTTGAGCTCTTTTTATATATTGGATATTAGTCCCCT
ATCAGATTTAGGATTGGTAAAAATCCTTTCCCAATCTGTTGGTGGCCTTT
TTGTCTTATTGACAGTGTCTTTTTTCCTTTCCGAGGCTTGGCAAGTTTAT
GAGGTGCCATTTGTTGATTCTTGATCTTACAGCACAGGCCATTGCTGTTC
TGTTTAGGAATTTTTCCCTTGTGCCCATATCTTCGAGGCTTTTCCCCACT
TTCCCTTCTATTAATTTCAATGTCTCTGGTTTTATGTGGAGGTCTTTGAT
CCACTTAGACTTGAGCTTTGTATAAGGAGATAAGAATGGATCAATTCGCA
TTCTTCTACATGATAACTGCTAGTTGTGCCAGCACCATTTGTTGAAAATG
CTGTCTTTTTTTCCCCACTGGATGGTTTTAGCTCCCTTGTCAAAGATCAA
GTGACCATAGGTGTGGATATCATGTTGGTTTTGTCTTTGAATTTGTTTAT
ATAGTGGATTACATTGGTGGATTTCCATATAATACTAAACCATCCATGCA
TCCCTGGGATGACGCCTACTTGGTCACAATGGATGATCACTTTGATGTGT
TCATGGATTCGGTTTGGGAGGATTN

CGATTGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTTGATGCTGCTACAAGGAAGTCTA
GTGAGTGCAATCAGGCTTTTTTGACAAAGCCAGTGCCTCTAAAACAGACT
GACTACTACTCATACTTATTTTAAAAATTATTTTTATTTTTTTAAAATGA
GTATACTGAATGAGAGTTTTAAGGAAACAGAGCATCACCATAAGAAAACT
ATGGAAATTCCTGTATCACCCCATAATGCCAAATAGAAGTAATTGCAAAA
CAGGTGTTCTCATGGTTTCCAATGTACTCCAGAAGATTATTTGAGGCATC
ACAATTGTGTTTAGTATTTCTAAGATGGTAATTGTGAAAGACGATGACAT
GGAGTCCATTCAAGGTTGAAAAGTAGGGGGAAATGTACAACAATCCCAAT
AGAGTATACAATAGAGTCTTATTATATTCAGCTTATTATATTCACTTATT
CAGCTTACTAAGTTGACAAGAGGACCCAATGAGCAATGGACACCATCTTC
TTACTTATCAATCTTAATTATATGGTTAAAGAAAATATGATAGGAGCTGT
CTCATTCTCCCCAATACTTCTACTTGAGTTAGATGCTTAGCAAGAATTAG
TTTGTTCCAAATATATTTACACCACTTGTACATGATAATGTGATTTATGA
TTGAATTTATTATCATGTAAACTACTGAAA

Query= MSMg01no324_m12.g1 MSMg01no324_m12.g1 CHROMAT_FILE:
MSMg01no324_m12.g1 PHD_FILE: MSMg01no324_m12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:11 2005
         (655 letters)



>mm_chrX_127297559_127298614
          Length = 1056

 Score = 1180 bits (610), Expect = 0.0
 Identities = 640/656 (97%), Gaps = 11/656 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   cttgatgctgctacaaggaagtctagtgagtgcaatcaggcttttttgacaaagccagtg 60
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 201 cttgatgctgctacaaggaagtctagtgagtgcaatcaggattttttgacaaagctagtg 260

                                                                       
Query: 61  cctctaaaacagactgactactactcatacttattttaaaaattatttttatttttttaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctctaaaacagactgactactactcatacttattttaaaaattatttttatttttttaa 320

                                                                       
Query: 121 aatgagtatactgaatgagagtttt-aaggaaacagagcatcaccataagaaaactatgg 179
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 aatgagtatactgaatgagagtttttaaggaaacagagcatcaccataagaaaactatgg 380

                                                                       
Query: 180 aaattcctgtatcaccccataatgccaaatagaagtaattgcaaaacaggtgttctcatg 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaattcctgtatcaccccataatgccaaatagaagtaattgcaaaacaggtgttctcatg 440

                                                                       
Query: 240 gtttccaatgtactccagaagattatttgaggcatcacaattgtgtttagtatttctaag 299
           |||||||          |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtttcca----------gaagattatttgaggcatcacaattgtgtttagtatttctaag 490

                                                                       
Query: 300 atggtaattgtgaaagacgatgacatggagtccattcaaggttgaaaagtagggggaaat 359
           ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 491 atggtaattgtgaaagatgatgacatggagtccattcaaggttgaaaaatagggggaaat 550

                                                                       
Query: 360 gtacaacaatcccaatagagtatacaatagagtcttattatattcagcttattatattca 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gtacaacaatcccaatagagtatacaatagagtcttattatattcagcttattatattca 610

                                                                       
Query: 420 cttattcagcttactaagttgacaagaggacccaatgagcaatggacaccatcttcttac 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 cttattcagcttactaagttgacaagaggacccaatgagcaatggacaccatcttcttac 670

                                                                       
Query: 480 ttatcaatcttaattatatggttaaagaaaatatgataggagctgtctcattctccccaa 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 ttatcaatcttaattatatggttaaagaaaatatgataggagctgtctcattctccccaa 730

                                                                       
Query: 540 tacttctacttgagttagatgcttagcaagaattagtttgttccaaatatatttacacca 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 731 tacttctacttgagttagatgcttagcaagaattagtttgttccaaatatacttacacca 790

                                                                   
Query: 600 cttgtacatgataatgtgatttatgattgaatttattatcatgtaaactactgaaa 655
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 cttgtacatgataatgtgatttatgattgaatttattatcatgtaaactactgaaa 846


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1056
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1046
Effective search space:   674670
Effective search space used:   674670
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)