Query= MSMg01no327_g03.b1 MSMg01no327_g03.b1 CHROMAT_FILE:
MSMg01no327_g03.b1 PHD_FILE: MSMg01no327_g03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:16 2005
(369 letters)
>mm_chrX_158688831_158689599
Length = 769
Score = 650 bits (336), Expect = 0.0
Identities = 351/356 (98%)
Strand = Plus / Minus
Query: 14 attaagctttgcttactcatataaataacccagactttcaaattcacaaaacttgtgatt 73
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 attaagttttgcttactcatataaataacccagactttcaaattcacaaaacttgtgatt 510
Query: 74 cctataaacactatttactagagctagagtgaagttaggcttcgccacatctgtcttttg 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 cctataaacactatttactagagctagagtgaagttaggcttcgccacatctgtcttttg 450
Query: 134 agggacactaagttaaagagagtcagagttagaatatttcagtttacggaactgcaaagc 193
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 449 agggacactaagttaaagagagtcagagttagaatatttcagtttacagaactgcaaagc 390
Query: 194 aattttctagaatccaatatgcaaaatggtcaatttgctgaatggttaccgcacggcaca 253
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 389 aattttctagaatccaatatgcaaaatggtcaatttgctgaatgactaccgcacggcaca 330
Query: 254 attttgcctttgtgaatccttttgttcgcttgatgggttttcatttttaagaaatattga 313
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 329 attttgcctttgtgaatccttttgttcgcttgatgggttttcatttttaaggaatattga 270
Query: 314 atttgcctttgccctagttccttgtcactacagttgaatctggggagaataaagaa 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 atttgcctttgccctagttccttgtcactacagttgaatctggggagaataaagaa 214
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 769
Length adjustment: 9
Effective length of query: 360
Effective length of database: 760
Effective search space: 273600
Effective search space used: 273600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no327_g03.g1 MSMg01no327_g03.g1 CHROMAT_FILE:
MSMg01no327_g03.g1 PHD_FILE: MSMg01no327_g03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:16 2005
(599 letters)
>mm_chrX_158478748_158479748
Length = 1001
Score = 1081 bits (559), Expect = 0.0
Identities = 590/601 (98%), Gaps = 2/601 (0%)
Strand = Plus / Plus
Query: 1 ccagaggcaaaatttttctgggatttaaaaacacacctgggatgtcttgtcattcttcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccagaggcaaaatttttctgggatttaaaaacacacctgggatgtcttgtcattcttcat 260
Query: 61 gtaaaaaaaaaaaaaaaaa--ctttgatcttcatcactctgtggtgaggtgtggcttcag 118
||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 gtaaaaaaaaaaaaaaaaaaactttgatcttcatcactctgtggtgaggcgtggcttcag 320
Query: 119 gtatttgtgtctttctagctcaaagcaaaaatctggcacgagtgatggctggaaaataac 178
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 gtatttgtgtctttctagctcaaagcaaaaatctgacacgagtgatggctggaaaataac 380
Query: 179 gatagttcacaggagcacacaagtcacagtagaaaagatctcattgcttaaatactctac 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatagttcacaggagcacacaagtcacagtagaaaagatctcattgcttaaatactctac 440
Query: 239 atatctaaatagcaacaatattatctcttatttacttgcaaatgataaacttgtgaagcc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atatctaaatagcaacaatattatctcttatttacttgcaaatgataaacttgtgaagcc 500
Query: 299 caggaaatactgtatctgaagatctcaccttttgataatagagacaccacaagtttttgc 358
|||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||
Sbjct: 501 caggaaatactgtatctgaagatctcaccttttgataatagagagattagaagtttttgc 560
Query: 359 ctgtttttgtctctcagctattttagggttgtttattttaccaaagaatataataaaaat 418
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 561 ctgtttttgtctctcagctattttagggttgtttagtttaccaaagaatataataaaaat 620
Query: 419 ggacagatggatttttaaaaacatatacaggtttggggaaaagttataaaagattacaag 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggacagatggatttttaaaaacatatacaggtttggggaaaagttataaaagattacaag 680
Query: 479 aaattttaaatttggacaatttaaactaaactccagtatgataaacttgttcatttaatc 538
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaatctcaaatttggacaatttaaactaaactccagtatgataaacttgttcatttaatc 740
Query: 539 caactaatgtattttccagtcttaagtatggccatggaaaggtatatcactgctctttgg 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 caactaatgtattttccagtcttaagtatggccatggaaaggtatatcactgctctttgg 800
Query: 599 c 599
|
Sbjct: 801 c 801
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 1001
Length adjustment: 10
Effective length of query: 589
Effective length of database: 991
Effective search space: 583699
Effective search space used: 583699
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
