CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAGGCAGTCCCATTTTAGATTTTTCCTGCTGCTAAGACCACTAGTGT
TCTCTGGTACATTCAACCTTACTGATCTCCAGGCGACTAGACTTGTCAGG
GTCAGAGTGGAAACTGGATATTTTACAACCAATTATCTGGGCCACTTGCC
TACCGCTGGTCACCTCAGTTTCTCTACCTAAATTCCTTACTGATAATTTC
CTCAGCATGCAGCCTGCCATGATTCACAGACAGGAACAAAAACTGCTTCT
GCCTCAGTATTAAATTCAAGTCCTTTCTCTTCTTCAGGAATGTTAATATT
TGACGATATACAAATGCATTTATCTGAGAAAGAATGGGCTATGCTAACCC
ATCGAAGAAGACACTCTACAGCGTTGTAATGCTGGTCATCTACAAGCTAA
CCACCTGTCTAGGTTAACTGATTAACTATAACTCATTTCCTTTGTGCATA
CATTGTGTAACCTGGACTGTAATGGTGAAAAATACACCCTGGGAGATATT
ACCTTTTGGGTTATAATTGATTTAGATTGCTTCTTCACTGTTGAAGCAGG
AACTGCTACAGAAAAAAAAATTTCTATGTTATTTTTTTGGGGTTATTTGT
TTTCTTTGCTTTTTAAAGATACAATTTCTCTGCATAACCCTGGTTGTCTT
CAAGATCAATCTGTACAGT

CATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXAGTAAGGATGCTGCCTATTTGGGTAC
ATTCAGATTAACCTCTAGTATTGTAAGAGAGACAGTGAAAGAAATCAGGC
ATTACTAACTGCTATATAGAGTTAGAAATCTCAGGACAAACTACCATATG
CAAGAATTTACCATTATCTCGAAATAAGGAATGTTATGTTATAAGGATCA
AGCAGAATAGATACTTAGAACTATAGATAGTTGAGTTTCAAACATGCACA
GGAATTTACAATGGCCTAGGGTGGAGGGGTACTATATAATAGACTAGAAG
AGGAACCATTGTAAGGGCATGAGACTCTTGCCTATTGCTTCTAAGATTAA
GCAAACCTTAGAGGGCGCCTGCTTGTAATCACAGTTGTTAACATTGAATT
CTATCCCAATTGGTCCCTCCCAGTCCTTTGTAGGCATTCCTCTATTTTGT
GTAAAAGTCACTTATAAGACTAGTGCTCGCTTTGAGACAAATTACATTCA
GATCTACCCTCTGTTTGGTCGAGTCAGTTTCTCAGCCCCTCTTCTTGGAT
AATCCTTGCCTACCGGTATCCAGAACCCAAGTTTATGCCCATGGACCCAG
GACCTATGTGAGGTTTGTCTGCGCCCAGATACTTTTCCTTTTACTATAAT
TACTTCCTATATATTCCTCCG

Query= MSMg01no328_e10.b1 MSMg01no328_e10.b1 CHROMAT_FILE:
MSMg01no328_e10.b1 PHD_FILE: MSMg01no328_e10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:23 2005
         (649 letters)



>mm_chrX_53520464_53521510
          Length = 1047

 Score =  489 bits (253), Expect = e-142
 Identities = 481/565 (85%), Gaps = 30/565 (5%)
 Strand = Plus / Plus

                                                                       
Query: 8   ttcaggcagtcc-cattttagattttt-cctgctgctaagaccactagtgttctctggta 65
           ||||||||| || |||||||| ||||| |||||||||||| || ||||||||||  ||||
Sbjct: 212 ttcaggcag-cctcattttag-tttttccctgctgctaagccccctagtgttctggggta 269

                                                                       
Query: 66  cattcaaccttactgatctccaggcgactagacttgtcagggtcagagtggaaactggat 125
           ||||| |||||||||||||||||| ||||||||||| || | ||||||||||||||||||
Sbjct: 270 cattcgaccttactgatctccaggtgactagacttggcatgatcagagtggaaactggat 329

                                                                       
Query: 126 attttacaaccaatt-atctgggccacttgcctaccgctggtcacctc-agtttctctac 183
           |||| |||||| ||| | |||| ||||||||||||  || |||| ||| | |||||| ||
Sbjct: 330 atttcacaaccgattca-ctggtccacttgcctacttctagtcatctcaaatttctccac 388

                                                                       
Query: 184 ctaaattccttactgataatttcctcagcatgcagcc--tgccatgattcacagacagga 241
           |||||||| |||||||||||||| ||| |||| ||||  || |||||||||||| |||| 
Sbjct: 389 ctaaattctttactgataatttcttcaacatgaagcctatgtcatgattcacaggcaggc 448

                                                                       
Query: 242 acaaaaactgcttctgcct-cagtattaaattcaagtcctttctcttcttcagga-atgt 299
           || | ||||||||||| || ||||||||||||||||||| |||| ||||||||||  |||
Sbjct: 449 actacaactgcttctg-ctgcagtattaaattcaagtccgttcttttcttcaggacttgt 507

                                                                       
Query: 300 taatatttgacgatatacaaatgcatttatctgagaaagaatgggctatgct-aacccat 358
           ||| |||||| ||| || ||||||| || |||||| ||||||||||||| || ||||| |
Sbjct: 508 taacatttgaagatgtagaaatgcaattctctgaggaagaatgggctatactgaaccctt 567

                                                                       
Query: 359 --cgaagaagacactctacagcgttgtaatgctggtcatctacaagctaaccacctgtct 416
             |  |||||||||||||||| | ||||||||||| |||||||||||||||||||| |||
Sbjct: 568 tcc--agaagacactctacagtgatgtaatgctggacatctacaagctaaccacctctct 625

                                                                       
Query: 417 aggttaactgattaactataactcatttcctttgtgcatacattgtgtaacctggactgt 476
           |||| ||  |       ||||||| |||||||| || |||||||| ||||||||||||| 
Sbjct: 626 aggtaaa--g-------ataactcctttcctttttgtatacattgagtaacctggactg- 675

                                                                       
Query: 477 aatg-gtgaaaaatacaccctgggagatattaccttttgggttataattgatttagattg 535
             || |||||||||||||||||||||| ||  ||| ||||| ||||||||||||||||||
Sbjct: 676 --tgcgtgaaaaatacaccctgggagaaatcccctgttgggctataattgatttagattg 733

                                    
Query: 536 cttcttcactgttgaagcaggaact 560
           |||||||||||||||| ||||||||
Sbjct: 734 cttcttcactgttgaatcaggaact 758


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1047
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1037
Effective search space:   662643
Effective search space used:   662643
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)