Query= MSMg01no329_l12.b1 MSMg01no329_l12.b1 CHROMAT_FILE:
MSMg01no329_l12.b1 PHD_FILE: MSMg01no329_l12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:16 2005
(151 letters)
>mm_chrX_40797910_40798460
Length = 551
Score = 259 bits (134), Expect = 5e-74
Identities = 143/146 (97%)
Strand = Plus / Minus
Query: 4 ggaattcttcagtgttacagattttcctttttaaagacttcctcagtacttgcaactttt 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ggaattcttcagtgttagagattttcctttttaaagacttcctcagtacttgcaactttt 290
Query: 64 aaaaactatgtggtcataaaaggagcaaaaagtcatctatctgagacttcatgcacactg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 289 aaaaactatgtggtcataaaaggagcaaaaagtcatctatctgagacttcatggacactg 230
Query: 124 ttgttgcttagcttgtgttcctattc 149
||||||||||| ||||||||||||||
Sbjct: 229 ttgttgcttagtttgtgttcctattc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 151
Length of database: 551
Length adjustment: 8
Effective length of query: 143
Effective length of database: 543
Effective search space: 77649
Effective search space used: 77649
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no329_l12.g1 MSMg01no329_l12.g1 CHROMAT_FILE:
MSMg01no329_l12.g1 PHD_FILE: MSMg01no329_l12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:17 2005
(243 letters)
>mm_chrX_40615604_40616249
Length = 646
Score = 460 bits (238), Expect = e-134
Identities = 243/246 (98%), Gaps = 3/246 (1%)
Strand = Plus / Plus
Query: 1 agtgtgaacacagttcttttgaaaaaaaatagttattaaactttatttttattatgaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgtgaacacagttcttttgaaaaaaaatagttattaaactttatttttattatgaaat 260
Query: 61 taatattttattctataaaacagaagaaagtgagatttcataacttaaatacagattgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taatattttattctataaaacagaagaaagtgagatttcataacttaaatacagattgtt 320
Query: 121 aaataaaaatgtcaattctcattttttt---gctttagctgatattttattcattctttg 177
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 aaataaaaatgtcaattctcattttttttttgctttagctgatattttattcattctttg 380
Query: 178 cagatttcatcttttgactttaacttgataatatgtcccttcctaattctcttttgagcc 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagatttcatcttttgactttaacttgataatatgtcccttcctaattctcttttgagcc 440
Query: 238 ctccca 243
||||||
Sbjct: 441 ctccca 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 646
Length adjustment: 9
Effective length of query: 234
Effective length of database: 637
Effective search space: 149058
Effective search space used: 149058
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
