Query= MSMg01no330_g02.b1 MSMg01no330_g02.b1 CHROMAT_FILE:
MSMg01no330_g02.b1 PHD_FILE: MSMg01no330_g02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:04 2005
(311 letters)
>mm_chrX_106054392_106055102
Length = 711
Score = 542 bits (280), Expect = e-158
Identities = 298/304 (98%)
Strand = Plus / Plus
Query: 5 gaattcacatattaacatatttattcaatactttttgttgccagatgttgtaatagacca 64
||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 205 gaattcacatattaaaatatttattcaatactttttgttgccagctgttgtaatagacca 264
Query: 65 aagacactaagtgccaaacaagataggattgttcagtggtaggtattgtgacattgtaga 124
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aagacactaagtggtaaacaagataggattgttcagtggtaggtattgtgacattgtaga 324
Query: 125 gattcctggatgcattatcttttctgattgcacttagggccttgtgaatgttagatgagc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gattcctggatgcattatcttttctgattgcacttagggccttgtgaatgttagatgagc 384
Query: 185 tttctcagtgggactgtaaggtcttagagataaaaggacagctactaaagccttatgata 244
|||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 385 tttctcggtgggactgtaaggtcttagagataaaaggacagcttctaaagccttatgata 444
Query: 245 acttgcttctacttaaataacaagaaatggtaagaaatcaaaatgagccaatagaaaggc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acttgcttctacttaaataacaagaaatggtaagaaatcaaaatgagccaatagaaaggc 504
Query: 305 tgag 308
||||
Sbjct: 505 tgag 508
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 711
Length adjustment: 9
Effective length of query: 302
Effective length of database: 702
Effective search space: 212004
Effective search space used: 212004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no330_g02.g1 MSMg01no330_g02.g1 CHROMAT_FILE:
MSMg01no330_g02.g1 PHD_FILE: MSMg01no330_g02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:04 2005
(284 letters)
>mm_chrX_106221349_106222031
Length = 683
Score = 518 bits (268), Expect = e-151
Identities = 279/286 (97%), Gaps = 7/286 (2%)
Strand = Plus / Minus
Query: 1 ctttgtttcacacacaagatctaacaatttgtatgaacaactgctt---ccccaggaaca 57
|||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 482 ctttgtttcacacacaagatctaacaatttgtatgaacaactgcttgag----aggaaca 427
Query: 58 gatgtgaggacttagataagttcttgaaatgcaaacaaagcaaaagtcataatttaagaa 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gatgtgaggacttagataagttcttgaaatgcaaacaaagcaaaagtcataatttaagaa 367
Query: 118 cagtttcctgtcatgttacagataaaattgagctggcaaaatcagtaagtttatacattt 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 cagtttcctgtcatgttacagataaaattgagctggcaaaatcagtaagtttatacattt 307
Query: 178 tatgggcaaaacttagcctaaactcacaaaacaatggcttcagctttaatatttaaacaa 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tatgggcaaaacttagcctaaactcacaaaacaatggcttcagctttaatatttaaacaa 247
Query: 238 ttgttcataaattttcataaagcaaaaccttcacaatcaaaataca 283
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ttgttcataaattttcataaagcaaaaccttcacaatcaaaataca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 683
Length adjustment: 9
Effective length of query: 275
Effective length of database: 674
Effective search space: 185350
Effective search space used: 185350
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
