TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTCTTTCTTCAAGGAGCAGTTATAGTCTTGCCATTAGGAGAAACATCCAA
GGTCAGCGTTGTCAACTGTAGACACAGTAGGACAAGGTGATGTTTATGTT
TGTAAATTGTTTGATGACCCTGAGAAATGTTCCTCCCTCTTTCAAATGAA
AGTGAAAATAGAATTAAATTTTTTCAATTATTTTTTCAAAATTACAGTTT
ACAATATGACCATTTTTCCCTTGTTTGGTTTTAACAAGGTGGGCATTTGG
GAGTACAGTTAATTATAAAGAAATATACATTTATTATCATATCAGACACT
CTAGATAGTGCTTAATTAATGATTAAATTTTTAAAAATTAGCATATGACA
CCTTGTGTTTTCAGAGAAATGACAGGGTGCAAGGTTAAGAGGAGAAGGAC
TAAATTTTGATGTTCAGACATTTTCTTAGAAAGAAGGTGACCCAGTGAAC
TTGACTTAGTTATTTAGCATCTCAGAGATTCAATTTTATAATTTTTTTAA
ATGTAATTTATAATAGCAATATCGCATATTTACATTTCACTCTATAGTGT
GCAAATGTATATTCTCTTCTTTTGATCCTTACCCCAATATTGATAGAAGT
AGGCAGGCCTTATTAACTCCTTTAGCAAATGAGAAAAGCTATTTTTATAA
NGACAAAGGACTGCTTAAAGACCTTATTAATAAGTTTAAAATCTTTCC

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXAGGTGGCTTAAACATATCTAGAGAACTTTTG
GAGAAAGTGAAGAAAAAAATGTACAAACCAAATGAAAAGATCAATAAAAA
AATCTAAAGCCCCCCCCAATCATTTTACAGCCCCAAAGTAAAATACCTGA
TATGAGAAATTCACTAAGAGGATTTAAATGAATATTTTAAAATAGGCAAA
AGAAAGAATCAGTACTAAGTTTGTAGAACAGAAAATAATGTGGCAAGTTC
AAAGGATCCAAGGGATAACAAGTAAGCAGGATATGCATTGTGATGGCAAT
AAAAGGAGAGAATATGGTAGAAATTATATTTGTAATGTGGTAGAAGACAT
GACCATAATACCCAAGAAGATCAGTGAACATTAAATAAGATGAACTCAAA
GATAACACCATTGAGAATCAAGGTTGTGAAAACCAGAGAAAATCTTGAAA
GTGATAAGAGAAAAGCAACTTGGAACTCGCAAGTATTCTCCGTGAGATTA
TAAGCGGACTTCACATCAGGAAATAAGATTGCTAGNAAAGTACGCTAAAA
GAAAACAACTATCAGTAATTATTTTCTTCTAGAACATATTANNAAAAAAA
ACCAACTGTCTTCAATATGTGAGGCAATTGAAATGCGCCAGGCAAAAAAG
TTTTAGGATGCCTTAACCAGTTGAATGAAAGAACTTCCCAGAAAA

Query= MSMg01no336_h15.b1 MSMg01no336_h15.b1 CHROMAT_FILE:
MSMg01no336_h15.b1 PHD_FILE: MSMg01no336_h15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:33 2005
         (548 letters)



>mm_chrX_127747880_127748827
          Length = 948

 Score = 1044 bits (540), Expect = 0.0
 Identities = 543/544 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctctttcttcaaggagcagttatagtcttgccattaggagaaacatccaaggtca 64
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctttctttaaggagcagttatagtcttgccattaggagaaacatccaaggtca 264

                                                                       
Query: 65  gcgttgtcaactgtagacacagtaggacaaggtgatgtttatgtttgtaaattgtttgat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gcgttgtcaactgtagacacagtaggacaaggtgatgtttatgtttgtaaattgtttgat 324

                                                                       
Query: 125 gaccctgagaaatgttcctccctctttcaaatgaaagtgaaaatagaattaaattttttc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gaccctgagaaatgttcctccctctttcaaatgaaagtgaaaatagaattaaattttttc 384

                                                                       
Query: 185 aattattttttcaaaattacagtttacaatatgaccatttttcccttgtttggttttaac 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aattattttttcaaaattacagtttacaatatgaccatttttcccttgtttggttttaac 444

                                                                       
Query: 245 aaggtgggcatttgggagtacagttaattataaagaaatatacatttattatcatatcag 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaggtgggcatttgggagtacagttaattataaagaaatatacatttattatcatatcag 504

                                                                       
Query: 305 acactctagatagtgcttaattaatgattaaatttttaaaaattagcatatgacaccttg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acactctagatagtgcttaattaatgattaaatttttaaaaattagcatatgacaccttg 564

                                                                       
Query: 365 tgttttcagagaaatgacagggtgcaaggttaagaggagaaggactaaattttgatgttc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgttttcagagaaatgacagggtgcaaggttaagaggagaaggactaaattttgatgttc 624

                                                                       
Query: 425 agacattttcttagaaagaaggtgacccagtgaacttgacttagttatttagcatctcag 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agacattttcttagaaagaaggtgacccagtgaacttgacttagttatttagcatctcag 684

                                                                       
Query: 485 agattcaattttataatttttttaaatgtaatttataatagcaatatcgcatatttacat 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agattcaattttataatttttttaaatgtaatttataatagcaatatcgcatatttacat 744

               
Query: 545 ttca 548
           ||||
Sbjct: 745 ttca 748


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space:   504644
Effective search space used:   504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)