XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAA
TAAGGTACCAGAAATATTGAAAATGACTTAATCTGAAATTAAGTTGGAGT
TGAAAAACTCACCAACTAGCATAGTCTCAGGAAAGCCTTACAAATAGAAT
GACTCAAGCAGTAGATAAAATATCAGGAACTGATGATAAAACATGGTATC
TAGACCAAATAAGCAAGGGACATAAAATTTAAAGTAAACAACAGCAAAAC
AAACAAGAAATGAACATAAAGAGAATATGTGAAACCATAAAAAAAAACCT
TCAAATTATAGGCATAGATGAGGAAGAAAATGCACTAGATCTTCAACAAG
GTAACAGAAGAAGACTTTATGAAACTAAGGAAAGATAACACCCATACAGA
TACAAGAATCACAATGAACACTAAACAGAAAAGAAAATCCTCATTGCATA
TCACATCTAAAACTCTGTGTTTTTATAACAAAGAACTGATATTGAAAGTT
GCAAGAAAAAATATATGTCATATACAATGAAAACCCATCAGAATAACAAC
ATATTTTTCAGTGGAGGCATTAAAAGCCAAATGATCCTGAGAAATGCATT
ATTAAGACAACAAATAACAATTATCTATTAGTAGAAATAACAATTATCTA
TTAGTAGTAGCTAATAGACAGGGCATCTTGTCAAAAATAAACCAATAAAT
ATCAGAATTATTTGACAACATTTATCATTTGGACTTAGCATATAGTCATA
GAATATTCCA

AATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXATTAAAAAAACAGAATGTGTCTTAGT
TTTTCTATGTCCTCCTCAGCCCTTCTGATGCATACTCCACCCCACTATCC
AATGACAGAGTCCTCTTGCTGGCTTTTGATGGAGATCCTTCTTTTGAATC
TGGAACTCAGTTTTCAAATCCTCTTGCTTAAGAAAGAAATGTGTGACAGA
ACCATGCCTTGAGACCCCTGCTTTCAGAAAAGCTTTCCTTGATCAAGCAA
GTGTAGTAGAGAGCTAGTTTTGAACATGATTCATTCCCAAATTTTAAAAA
TTCCTGCTAGTTTCTCACAGATCAAAAAGTAGCTATGAATTAAATGCTAG
AATTACGTATGGAATACTACCAGTAGATTTGCATTGTTATGTAAATGCTA
AATTCAAAGAGTAGTACACACTTAATTCAACTAAGGTATTTGAACAATTA
TTTCTTTCAATATCCTTTGTTTTTGTCAGTGTAGGAGTTCAACTCAGTTC
AACATGTTAATTAAGCACTTATGTGATAGTCTTGTGCTCAAGATTTAGAG
AAACAGGAATAAGGTACGAGCTGTCCCTTCTTCTTCTTTTCTTCTTAATT
CAGTTTCCCCGGCCAATAAAGCTTTTTCTTCCCTCTTCCCTCCCCACTCT
CTCCTTCCCTTCCTCCCTCTCTACCTCTCT

Query= MSMg01no338_k18.g1 MSMg01no338_k18.g1 CHROMAT_FILE:
MSMg01no338_k18.g1 PHD_FILE: MSMg01no338_k18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:21 2005
         (651 letters)



>mm_chrX_38666844_38667894
          Length = 1051

 Score = 1212 bits (627), Expect = 0.0
 Identities = 642/647 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   aaaaaacagaatgtgtcttagtttttctatgtcctcctcagcccttctgatgcatactcc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 aaaaaacagaatgtgtcttagtttttctatgtcctcctcagcccttctgatgcatactcc 744

                                                                       
Query: 65  accccactatccaatgacagagtcctcttgctggcttttgatggagatccttcttttgaa 124
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 743 accccactatccaatgacagagtcctcttgctggctttggatggagatccttcttttgaa 684

                                                                       
Query: 125 tctggaactcagttttcaaatcctcttgcttaagaaagaaatgtgtgacagaaccatgcc 184
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 683 tctggaactcagttttcaaatcctcttgcttaagaaagaaatgcgtgacagaaccatgcc 624

                                                                       
Query: 185 ttgagacccctgctttcagaaaagctttccttgatcaagcaagtgtagtagagagctagt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ttgagacccctgctttcagaaaagctttccttgatcaagcaagtgtagtagagagctagt 564

                                                                       
Query: 245 tttgaacatgattcattcccaaattttaaaaattcctgctagtttctcacagatcaaaaa 304
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 563 tttgaacatgattcattcccaaattttaaagattcctgctagtttctcacagatcaaaaa 504

                                                                       
Query: 305 gtagctatgaattaaatgctagaattacgtatggaatactaccagtagatttgcattgtt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gtagctatgaattaaatgctagaattacgtatggaatactaccagtagatttgcattgtt 444

                                                                       
Query: 365 atgtaaatgctaaattcaaagagtagtacacacttaattcaactaaggtatttgaacaat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 atgtaaatgctaaattcaaagagtagtacacacttaattcaactaaggtatttgaacaat 384

                                                                       
Query: 425 tatttctttcaatatcctttgtttttgtcagtgtaggagttcaactcagttcaacatgtt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tatttctttcaatatcctttgtttttgtcagtgtaggagttcaactcagttcaacatgtt 324

                                                                       
Query: 485 aattaagcacttatgtgatagtcttgtgctcaagatttagagaaacaggaataaggtacg 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 323 aattaagcacttatgtgatagtcttgtgctcaagatttagagaaacaggaataaggtacc 264

                                                                       
Query: 545 agctgtcccttcttcttcttttcttcttaattcagtttccccggccaataaagctttttc 604
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 agctgtcccttcttcgtcttttcttcttaattcagtttccccggccaataaagctttttc 204

                                                          
Query: 605 ttccctcttccctccccactctctccttcccttcctccctctctacc 651
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ttccctcttccctccccactctctccttcccttcctccctctctacc 157


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space:   667281
Effective search space used:   667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)