TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCAAGGTCCACACCTAAACATGATAAAAGCAATCTACAGCAAACCAGTA
GCCAACATCAAAGTAAATGGAGAGAAGCTGGAAGCAATCCCACTAAAATC
AGGGACTAGACAAGGCTGCCCACTTTCTCCCTACCTTTTCAACATAGTAC
TTGAAGTATTAGGCAGAACAATTCGACAACAAAAGGAGATCAAGGGGATA
CAAATTGGAAAAGAGGAAGTCAAAATATCACTTTTTCCAGATGATATTAT
AGTATATATAAGTGACACTAAAAATTCCACCAGAGAACACCTAAACCTGA
TAAACAGCTTCGGTGAAGTAGCTGGATATAAAATTAACTCAATCCAGTCA
ATGGCCTTTCTCTACACAAAGAATAAATAGGCTGAGAAAGAAGTTAGGGA
AACAACACCCTTCTCTATAGTCACAAATAATATAAAATATCTCGGCGTGA
CTCTAACTAAGAAAGTGAATGATCTGTATGATAAAAACTTCAAGTCTCTG
AAGAAAGAAATAAAGAAGATCTCTGAAGATGGAAAGATCTCCCCCGCTCA
TGGATTGGCAGGAACCACATTGTCAAAATGGCTATCTTGCCCAAAGCAAT
CTACGGATTCAACGTAATCCCCCTTCAAATTCCACCTCTTTTCCTCCATT
GTATCAAAAAGAATAAATTTGCTTTTCCCTCCTGCCATAATAAAAAATCN

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCTAATTTAGACAAAGTGTACCTGATGAC
TCTTTGAGCCACTGAGAGTGATTTAAGCTCCACTTCAAGAATGGGGGGAC
AGTGTGAGTCTTTTTGGTGCTGAAGGGATAATTCTGAGGTTTTTGTGTCA
GAAACAGGACTTGGAGGACCCAGTGACAGAGTGATAATGTTGATGTATCC
ACAAACAATCTATAAAGGATGCCATCCTTTAGAGGCAGAAAGGTTTACAC
CATGTTGGGGAAAGTAGAAAGGCCAAAGACTATTGTATCTGTACAAGATC
AAGGGTCGATATGGAGAGGAGAGAAGGCCTGAATATTTCATGATTGAGAC
GTCCTGGGAACCTAGAACACGCAAATCATGCAGGCCATGCAACAGCTTAA
TCAATCTCCAGTGTGCTAGGAGACATTTCCCAGCTAGTTCTCCTGATAAT
TCTGCTGCCTACTTCTAAAAATGGCAAGGCTTTCTCATTTTTGCTGGGCA
GCTTAATGTCTATGTCTTGGGGTCATTAACGTGCTGGCTACTCTTAACTC
TGAGATTTCGGACCCCGGGCCTGATCCTTGGAAAGGGGGAATTAGTTCCA
AGAACCAAAAAAAAAACCCTTGGGGGCCCTTATATTAGGGAGGGGAATTT
TTTTGTGCTAATCACACCTCAACGGCGGGCCTTGTCCCTCCGTTTCCAAT
AAAC

Query= MSMg01no341_j11.g1 MSMg01no341_j11.g1 CHROMAT_FILE:
MSMg01no341_j11.g1 PHD_FILE: MSMg01no341_j11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:53 2005
         (471 letters)



>mm_chrX_121308153_121309023
          Length = 871

 Score =  652 bits (337), Expect = 0.0
 Identities = 431/463 (93%), Gaps = 4/463 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   atttagacaaagtgtacctgatgactctttgagccactgagagtgatttaagctccactt 63
           ||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||
Sbjct: 204 atttagacaaagtgtacctgatgactccttgagccattgagagagatttaagctccactt 263

                                                                       
Query: 64  caagaatggggggacagtgtgagtctt-tt-tggtgctgaagggataattctgaggtttt 121
           |||| |||||| || |||||||||||| || |  ||||||||| ||||||||||||||| 
Sbjct: 264 caagcatggggagaaagtgtgagtcttcttat--tgctgaaggaataattctgaggtttc 321

                                                                       
Query: 122 tgtgtcagaaacaggacttggaggacccagtgacagagtgataatgttgatgtatccaca 181
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 322 tgtgtcagaaacaggacttggaggacccattgacagagtgataatgttgatgtatccaca 381

                                                                       
Query: 182 aacaatctataaaggatgccatcctttagaggcagaaaggtttacaccatgttggggaaa 241
           |||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 382 aacaatctataaagaatgccatcctttagaggcagaaagattcacaccatgttggggaaa 441

                                                                       
Query: 242 gtagaaaggccaaagactattgtatctgtacaagatcaagggtcgatatggagaggagag 301
           ||||||| |||||||||| |||||||||||||||||||||||| ||| |||||||||| |
Sbjct: 442 gtagaaatgccaaagactcttgtatctgtacaagatcaagggttgatttggagaggagtg 501

                                                                       
Query: 302 aaggcctgaatatttcatgattgagacgtcctgggaacctagaacacgcaaatcatgcag 361
           |||||||||||||||||| || ||| | |||||||||||||||||||||| |||||||||
Sbjct: 502 aaggcctgaatatttcattatcgaggcttcctgggaacctagaacacgcatatcatgcag 561

                                                                       
Query: 362 gccatgcaacagcttaatcaatctccagtgtgctaggagacatttcccagctagttctcc 421
           ||||||||||||||||||||||||||| | ||||||||| ||||||||| ||||||||||
Sbjct: 562 gccatgcaacagcttaatcaatctccaatatgctaggaggcatttcccaactagttctcc 621

                                                      
Query: 422 tgataattctgctgcctacttctaaaaatggcaaggctttctc 464
           |||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 622 tgataaatctgctgcctacttctgaaaatggcaaggctttctc 664


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space:   396921
Effective search space used:   396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)