XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTGT
TCCGTTCTGAGCCCCATTTTTTAATGGGATTATTTGATTTTCTGAAGTCC
ACCTTCTTGAGTTCTATATATGTTGGATATTAGTCCCCTATCTGATTTAG
GATAGGTAAAGATCCTTTCCACTCTGTTGGTGGTCCTTTTGTCTTATTGA
CGGTGTCTTTTGCCTTGCAGAAACTTTGTAGTTTCATTAGGTCCCATTTG
TCAAGTCTCAATCTTACAGCACAAGCCATTGCTGTTCTGTTCAGGAATTT
TTCCCCTGTGCCCATACCTTCAAGGCTTTTCCCCACTTTCTCCTCTATAA
GTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATCCACTTAGATTTG
ACCTTAGTACAAGGAGATAAGTAAGGATCGATTCGCATTCTTCTACATGA
TAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATGCTGTCTTTCTTCC
ACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGACCATAGGTGTGT
GGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGTCTACTGGTCTGTC
TCTATACCAGTACCACGCAGTTTTTATCACAATTGCTCTGTAGTAAAGCT
TTAGGTCAGGCATGGTGATTCCACCAGAGGTTCTTTTACTCTTGAGAAGA
CTTTTTGCTATCCTAGGCTTTTTGTTATTC

TGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXAGAAACCTGAAGAGAGCAGAGTGAGAAATTGTTC
AGGAGAATGCAGGTTCTCTCAGAGGGAAACAAAGTGCTATGAATATGTGA
GTGCAGCTTTGCACAGAGGCCATTGTGCCTGTGAGTTCATGTTCCTGCTG
AGGACAGATTGCAATGGAGACAAAAGTGTAGGTGCCTGCTGATGTCTCAA
GTTGAGGATTAACCTGTTAGTGCAGGTGACTGCAGGGGCCAGGGAAGGGA
CCTGGGCAAATAAGTGCAGGAGCCTTCAGAAGACTAGGTTATGTGGGGAC
AGTGGGCTATACACAGACAAGCTGGTCTCCAGTTGAGTTGAGGTCTGAAC
TCTAGTAGAACCTGATGGGTGGCAATTCCCACCTACATGGGACAGAAGGT
GTTCCCTCATATCTTCTGGCCCCCTGGCTCCTGTTGAATTTACCACCCCC
ACATACCCCACAAGAGAGGATAGTGGCTAGCAGTCATGTACACAATGTCC
CAAGCTTCTGACCTTCAGGCTAGACTTCTCCCAGTTACCTAGCAACAACA
AGATAACAAGTCCACTATAAGAAGGGGCTGCTTTGCCCCACTCCTCACTC
TTTTAAGCTTTTACTTTCTTTAANCCCCCCTCTAACCCCCCTCTCTCTAA
ACCCTTCCCTTTTTTTAAAACCAAAACCCCTTTTCTCCCTTTCCTTTCCC
CCCTTCCTCCCGG

Query= MSMg01no346_f11.g1 MSMg01no346_f11.g1 CHROMAT_FILE:
MSMg01no346_f11.g1 PHD_FILE: MSMg01no346_f11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:01 2005
         (507 letters)



>mm_chrX_4767975_4768881
          Length = 907

 Score =  882 bits (456), Expect = 0.0
 Identities = 495/508 (97%), Gaps = 2/508 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   agaaacctgaagagagcagagtgagaaattgttcaggagaatgcaggttctctcagaggg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaaacctgaagagagcagagtgagaaattgttcaggagaatgcaggttctctcagaggg 260

                                                                       
Query: 61  aaacaaagtgctatgaatatgtgagtgcagctttgcacagaggccattgtgcctgtgagt 120
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaacaaagtgctatgaatatgtgtgtgcagctttgcacagaggccattgtgcctgtgagt 320

                                                                       
Query: 121 tcatgttcctgctgaggacagattgcaatggagacaa-aagtgtaggtgcctgctgatgt 179
           |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 321 tcatgttcctgctgaggacagattgcaatggaga-aagaagtgtaggtgcctgctgatgt 379

                                                                       
Query: 180 ctcaagttgaggattaacctgttagtgcaggtgactgcaggggccagggaagggacctgg 239
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctcgagttgaggattaacctgttagtgcaggtgactgcaggggccagggaagggacctgg 439

                                                                       
Query: 240 gcaaataagtgcaggagccttcagaagactaggttatgtggggacagtgggctatacaca 299
           |||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||
Sbjct: 440 gcaaataagtgcaggagccttcagaagacttggttatgtggggacattgggctaaacaca 499

                                                                       
Query: 300 gacaagctggtctccagttgagttgaggtctgaactctagtagaacctgatgggtggcaa 359
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 500 gacaagctggtctccagttgagttgaggtctgaactctagtagaacttgatgggtggcaa 559

                                                                       
Query: 360 ttcccacctacatgggacagaaggtgttccctcatatcttctggccccctggctcctgtt 419
           |||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||
Sbjct: 560 ttcccacctacatgggacagaaggcgttcccttatgtcttctggccccctggctcctgtt 619

                                                                       
Query: 420 gaatttaccacccccacataccccacaagagaggatagtggctagcagtcatgtacacaa 479
           ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gaagttaccacccccacattccccacaagagaggatagtggctagcagtcatgtacacaa 679

                                       
Query: 480 tgtcccaagcttctgaccttcaggctag 507
           ||||||||||||||||||||||||||||
Sbjct: 680 tgtcccaagcttctgaccttcaggctag 707


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space:   445809
Effective search space used:   445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)