Query= MSMg01no348_k06.b1 MSMg01no348_k06.b1 CHROMAT_FILE:
MSMg01no348_k06.b1 PHD_FILE: MSMg01no348_k06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:00 2005
(428 letters)
>mm_chrX_125827974_125828800
Length = 827
Score = 797 bits (412), Expect = 0.0
Identities = 424/428 (99%), Gaps = 1/428 (0%)
Strand = Plus / Plus
Query: 1 gcattttttgtggtatgtgacaccacaccataacctcaaagactaatgaacctatggacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcattttttgtggtatgtgacaccacaccataacctcaaagactaatgaacctatggacc 260
Query: 61 taatgaaaaagcaggtagacacgtgaaaatttacaagcacccttagaacatccaggcaag 120
||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||
Sbjct: 261 taatgaaaaagcaggtagacacgtgaaaa-ttataagcagccttagaacatccaggcaag 319
Query: 121 agaatctgacctaacaggagaagtatcatttgggataatagccccatcttaaatgcctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agaatctgacctaacaggagaagtatcatttgggataatagccccatcttaaatgcctct 379
Query: 181 gtgattaactggtgaggtaaagcatgggaaaatgaacccctaagtatcatgggaaagatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gtgattaactggtgaggtaaagcatgggaaaatgaacccctaagtatcatgggaaagatt 439
Query: 241 gaaagatcaggaacagaagttgacagattcatgaagaaaaggctatatgcaaaatccaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gaaagatcaggaacagaagttgacagattcatgaagaaaaggctatatgcaaaatccaca 499
Query: 301 gggcaatggaacactgtgaaaacaagcacttagagcattcagtgacaacaggaattaaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gggcaatggaacactgtgaaaacaagcacttagagcattcagtgacaacaggaattaaca 559
Query: 361 taattaccataaacaattaggggaatcacacgtctcaacttgaatctagagaattattta 420
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 560 taattaccataaacaattaggggaatcacacatctcaacttgaatctagagaattattta 619
Query: 421 cttctagt 428
||||||||
Sbjct: 620 cttctagt 627
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 827
Length adjustment: 9
Effective length of query: 419
Effective length of database: 818
Effective search space: 342742
Effective search space used: 342742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no348_k06.g1 MSMg01no348_k06.g1 CHROMAT_FILE:
MSMg01no348_k06.g1 PHD_FILE: MSMg01no348_k06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:00 2005
(485 letters)
>mm_chrX_126005326_126006210
Length = 885
Score = 926 bits (479), Expect = 0.0
Identities = 479/479 (100%)
Strand = Plus / Minus
Query: 7 catgttctgtcttccctcatcttctaataagcacacatattgagttgtggcccagctata 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 catgttctgtcttccctcatcttctaataagcacacatattgagttgtggcccagctata 826
Query: 67 tgacctcacttaactttaattgcttttttttttctcgaagtatgctttttcttttgagac 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 tgacctcacttaactttaattgcttttttttttctcgaagtatgctttttcttttgagac 766
Query: 127 agtttctccctaaactgacctcaaaaatttgatcttcctgccgtggcctcgtgggtttac 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 agtttctccctaaactgacctcaaaaatttgatcttcctgccgtggcctcgtgggtttac 706
Query: 187 aggtgtgcatacacccagctcaattacttttttaaaggccctgtttctgaagttagcaac 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 aggtgtgcatacacccagctcaattacttttttaaaggccctgtttctgaagttagcaac 646
Query: 247 atttggaaatagtgaggatgtcagcatatggaatcggggtgcataatttaaataataaca 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 atttggaaatagtgaggatgtcagcatatggaatcggggtgcataatttaaataataaca 586
Query: 307 attaatttcctactaagtaaatgtttcttcatctgatggatttgagaggtacaatcaaaa 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 attaatttcctactaagtaaatgtttcttcatctgatggatttgagaggtacaatcaaaa 526
Query: 367 taattccctaacattattttgaaatcctatgtaaaagcagagccctctcacaaacaaaat 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 taattccctaacattattttgaaatcctatgtaaaagcagagccctctcacaaacaaaat 466
Query: 427 tttgaatgaagaatcttaaaaacatacaaattgaaccttgaacctatatctgtttttat 485
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 tttgaatgaagaatcttaaaaacatacaaattgaaccttgaacctatatctgtttttat 407
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 885
Length adjustment: 10
Effective length of query: 475
Effective length of database: 875
Effective search space: 415625
Effective search space used: 415625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
