XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCC
TGTAATCCTTTGTATGAGACAAGGTTCCCTGGTCCTGCTACAAATCTTGA
CTCACTAAAACTTCAATTATTGGGACTAGGAGTGGTAATAACACATGTGT
TTAAACCTAAGCACTCCAGAGCCAGAATCCTCTATGATTTTGAGGCTAGC
CTGGTTTACACAGTGTGTCCCAGGTTACTCTAAGCTACATAATGAGATCC
TGGACAAAACCAAAACCAAAATTGAACTAGTACTTAAGTTTTTGGGGAAA
ACTGACCTACCTAATGGAAGGGTGATTTAAACTTCTGCTGGAAGCCCCAC
AGGCCTGGGCCAATCATTCTTTAATGCAGTCACTTAGGAAATTCAATGGT
GTGGATTCCCAAACCACTTTGAACAAAACATCTATTCCTTGTCTAGTTTC
TCTAATCTCTGACAGGACCGAAAAAAATGTCAATGCAGGTATCAGGTACC
ATGCCCTTTGTGGGCTATACTGGATATGTTGGGTACACAGCCTCGATTAT
ACTTTTTCTCACCTAATCAGGATTGTGTGTGTTGGGGACTAACTGTACAA
TTTTCTTCCTGTTCCAACTTACAGAGGGGGACATTTAGAAATCTAAAGTA
CTAGCCAGGTGGTGGTGGCACTCGACTTTATTCCCACCCCTTTGGAGGCG
AAGAAAGCCNAATTTTTGAGTTCAAGGCCCAGCTAACCCGCCAAGTGTGG
TTCCTGA

NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCTTCTAGTTTCTATGTGCACCACA
CATGCATGTTTATAAATACAAACATGCAAAAACAAATTACTTAAATAAAT
AAAACAATTGAAAATTACAAACAACAGCACCTTCATCTGAAACAAAGTAG
GAGAGTCTTGTTTGGGGTCCATTTTATTTTAGCTTTCAAGTTAGTATTGT
AAACTTGGAAAATGGAAAGCCTCTGGGTAGTAGTGGCAGCTAAAATACTA
CCTCCTTTTTGCTCTTCAATGACAGACGACTGATTGAGCCTTTCTCACCC
TTAGTACACATGTGCAAACACTGCCAATCAGCAAGGGCCTTGGCTGAGAT
TGTTTTCCGCTATCCAAACCCTGTTACCCAGTATGCTTTGTGGTAGTCAT
CAAGCCGAGTTCTTGTGGAAGCAAGGTTCTTGAGGAAGCATGGTAGGGAG
AAGTCTCAGTAGAGGTAGTCAATTGTCTGTTGAAAGATGATTAATCCTGT
TTGAGCTGGGGGCCTGTGTGTGGAATAAAGTGGAAGTGTTGGAGGCTCTC
CTCTTCCTCCCCCCTTTTTTTTTCGTCCTTTTTCCTTTTTTTTTTCTCTC
CCTTCTCCCTNTCCTTTTCTCTTCCTCCTCTCTTTTTCCTTCTATCCCTT
TTTTCCTCTCTCTTTATTCTTTTTTCCCTCTTTTCTTTTTTCGCCCCCGT
TTCTCCCTCTTGCCCTCACC

Query= MSMg01no349_d08.b1 MSMg01no349_d08.b1 CHROMAT_FILE:
MSMg01no349_d08.b1 PHD_FILE: MSMg01no349_d08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:45 2005
         (531 letters)



>mm_chrX_53074503_53075429
          Length = 927

 Score =  348 bits (180), Expect = e-100
 Identities = 431/522 (82%), Gaps = 30/522 (5%)
 Strand = Plus / Plus

                                                                       
Query: 7   attcctgtaatcctttgtatgagacaaggttccctggtcctgctacaaa--tcttgactc 64
           ||||||| |||||||| ||||||| ||| | |||  ||| |||||||||  | |||||||
Sbjct: 207 attcctgcaatcctttttatgagaaaagatgccccagtcttgctacaaaggt-ttgactc 265

                                                                       
Query: 65  actaaaacttcaattattgggactaggagtggtaataacacatgtgtttaaacctaagca 124
            | |||||||||||||||||| || || ||| || ||||||| |  ||||||||| || |
Sbjct: 266 ccaaaaacttcaattattggggctgggtgtgatagtaacacaagcctttaaacct-agta 324

                                                                       
Query: 125 ctccagagccagaatcctctatgattttgaggctagcctggtt--tacacagtgtgtccc 182
           | |||||| ||||  ||| | ||| ||||||||||||||  ||  |||| ||||||| ||
Sbjct: 325 ccccagagtcagaggcctttgtgagtttgaggctagcct--tttctacatagtgtgttcc 382

                                                                       
Query: 183 aggttactctaagctacataatgagatcctgga--caaaaccaaaaccaaaattgaacta 240
           || ||||||| ||||||||||  ||| |||  |  ||||||||||||||||| |||| ||
Sbjct: 383 agattactctgagctacataaaaagaccct--atccaaaaccaaaaccaaaactgaagta 440

                                                                       
Query: 241 gtactt-aagtttttggggaaaactgacctacctaatggaagggtgatttaaacttctgc 299
            ||||| || || |||||||||||||||||||||| | |||| |||||||||| | || |
Sbjct: 441 atacttcaa-ttgttggggaaaactgacctacctagtagaagtgtgatttaaaatccttc 499

                                                                       
Query: 300 tggaagccccacaggcctgggccaatc-attctttaatgcagtcacttaggaaattcaat 358
           ||||||||||||| | ||||||||| | ||||| ||||||||||||||||   || ||||
Sbjct: 500 tggaagccccacatgtctgggccaa-caattctataatgcagtcacttag---atccaat 555

                                                                       
Query: 359 ggtgtggattcccaaaccactttgaacaaaacatctattccttgtctagtttctctaat- 417
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 556 ggtgtggatccccaaaccactttgaacaaaacatctattccttgtctagtttctctaatg 615

                                                                       
Query: 418 ctctgacaggacc--gaaaaaaatgtcaatgcaggtatcaggtaccatgcc--ctttgtg 473
           | ||||| ||  |  |||| || || |||||||| ||||| ||||||||||  || |   
Sbjct: 616 c-ctgactgg--cttgaaacaa-tgccaatgcagatatcaagtaccatgccgcctata-- 669

                                                     
Query: 474 ggctatactggatatgttgggtacacagcctcgattatactt 515
           | ||||||||||||||| ||| ||||||| |  |||||||||
Sbjct: 670 gactatactggatatgtgggggacacagcttatattatactt 711


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 927
Length adjustment: 10
Effective length of query: 521
Effective length of database: 917
Effective search space:   477757
Effective search space used:   477757
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)