Query= MSMg01no349_m21.b1 MSMg01no349_m21.b1 CHROMAT_FILE:
MSMg01no349_m21.b1 PHD_FILE: MSMg01no349_m21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:32 2005
(600 letters)
>mm_chrX_43057075_43058073
Length = 999
Score = 1108 bits (573), Expect = 0.0
Identities = 593/600 (98%), Gaps = 1/600 (0%)
Strand = Plus / Minus
Query: 1 tcaatcttaaattggcacaactggggatccacaaatgtgacagctgcatgacagaaagat 60
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 799 tcaatcttaaattggtacaactggagatccacaaatgtgacagctgcatgacagaaagat 740
Query: 61 agcaggtgttgttcagtgatgtttgtagaagattaaataatacttacctattacttcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 agcaggtgttgttcagtgatgtttgtagaagattaaataatacttacctattacttcttg 680
Query: 121 atgtttaaaagcaaaagtgagaataaggtcattgttctctctcaatgaagtggaagaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 atgtttaaaagcaaaagtgagaataaggtcattgttctctctcaatgaagtggaagaatt 620
Query: 181 tacaacacaaaaaagtaattaacatattggtcagctgtgtagacgaatatgaatttttaa 240
|||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 619 tacaacac-aaaaagtaattaacatattggtcagctgtgtagaagaatatgaatttttaa 561
Query: 241 tcttcaactgcattatacatcaaaatggtcaattattcttatttagaataggaaatccag 300
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 560 tcttcaactgcattatacatcaaaatggtcaattatacttatttagaataggaaatccag 501
Query: 301 tacctgagctggagactggtttactagaagttgggtgagaataaagatagatgcttttca 360
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tacctgagctggagactgatttactagaagttgggtgagaataaagatagatgcttttca 441
Query: 361 aacagtaatgtgatgctattacaggtgaccttgggtctctcatgtccttgggtactgctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aacagtaatgtgatgctattacaggtgaccttgggtctctcatgtccttgggtactgctt 381
Query: 421 cacatagtataaattttctcaagatttcaagaatgttgattgtttctccttatttgctcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cacatagtataaattttctcaagatttcaagaatgttgattgtttctccttatttgctcc 321
Query: 481 tataggtcatctcctcagtatttcagtanatgaacccaggaacatgcttgtcaaaggcaa 540
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 320 tataggtcatctcctcagtatttcagtaaatgaacccaggaacatgcttgtcaaaggcaa 261
Query: 541 gggatggaacaaagttaagtatcaatgtttttgtcaaactggaatgttctaagcagcctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gggatggaacaaagttaagtatcaatgtttttgtcaaactggaatgttctaagcagcctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 999
Length adjustment: 10
Effective length of query: 590
Effective length of database: 989
Effective search space: 583510
Effective search space used: 583510
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no349_m21.g1 MSMg01no349_m21.g1 CHROMAT_FILE:
MSMg01no349_m21.g1 PHD_FILE: MSMg01no349_m21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:32 2005
(564 letters)
>mm_chrX_42877864_42878827
Length = 964
Score = 1075 bits (556), Expect = 0.0
Identities = 562/564 (99%)
Strand = Plus / Plus
Query: 1 aaattttggaatatgtattgctggtcctcttcctaccctattatttttctactttctaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaattttggaatatgtattgctggtcctcttcctaccctattatttttctactttctaca 260
Query: 61 ctatccagcaaatggccacagcaaaacatccttacttgccaaccaatgggaattttaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctatccagcaaatggccacagcaaaacatccttacttgccaaccaatgggaattttaaat 320
Query: 121 gcactttaaaataatctcatttatagatttgaaaatagctcctaggttgattttaactgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcactttaaaataatctcatttatagatttgaaaatagctcctaggttgattttaactgc 380
Query: 181 tctaataatttcacctctagtttcctctcttcttcctttcctttctctctctttttctct 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctaataatttcacctctagttccctctcttcttcctttcctttctctctctttttctct 440
Query: 241 ctttctgctactttcatttataaagcaataccaaaaatgcaattgcttgtgggtgtgaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctttctgctactttcatttataaagcaataccaaaaatgcaattgcttgtgggtgtgaca 500
Query: 301 aagagtcaattgagttcttaatttcattgatgcagacttaataagaaaaaaatatcctaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagagtcaattgagttcttaatttcattgatgcagacttaataagaaaaaaatatcctaa 560
Query: 361 cgtaattttaaatagtgtgttaccaatttacttactaattcatgctcaggaggtaataca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cgtaattttaaatagtgtgttaccaatttacttactaattcatgctcaggaggtaataca 620
Query: 421 aaataaaatctgtattttgaaaattagaattgtaaatttgcattctgattctctattcca 480
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaataaaatctgtatcttgaaaattagaattgtaaatttgcattctgattctctattcca 680
Query: 481 gagtttcaattctttaacttcctttctgatcatcaaaatttcatttagtctgtaaagcca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gagtttcaattctttaacttcctttctgatcatcaaaatttcatttagtctgtaaagcca 740
Query: 541 taaagttttatttgcctatactct 564
||||||||||||||||||||||||
Sbjct: 741 taaagttttatttgcctatactct 764
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space: 528516
Effective search space used: 528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
