Query= MSMg01no351_d08.b1 MSMg01no351_d08.b1 CHROMAT_FILE:
MSMg01no351_d08.b1 PHD_FILE: MSMg01no351_d08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:24 2005
(608 letters)
>mm_chrX_56464507_56465514
Length = 1008
Score = 768 bits (397), Expect = 0.0
Identities = 406/409 (99%)
Strand = Plus / Plus
Query: 5 gaattcaagggcatcctttacaacatagcgagcctaggtcgcacaaaagatgaagtcaac 64
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 205 gaattcaagggcatcctttacaacatagcgagcctaggtctcacaaaagatgaagtcaac 264
Query: 65 aaaaacatactctgccatcacagctaatgggctgagccctggtgtgctatggatgatggt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaaaacatactctgccatcacagctaatgggctgagccctggtgtgctatggatgatggt 324
Query: 125 atgtacttttagtgactagggtgacagaatggttcaagggccatggcattagaaaggact 184
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atgtacttttagtgactggggtgacagaatggttcaagggccatggcattagaaaggact 384
Query: 185 gctctctatgaagtcacatgtcagttgcattttgacatcaaatgactctattcattttca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gctctctatgaagtcacatgtcagttgcattttgacatcaaatgactctattcattttca 444
Query: 245 tctgttatgctgggttcaaagcccttacctgtggtctaaactgtcagattcagttaggtg 304
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tctgttacgctgggttcaaagcccttacctgtggtctaaactgtcagattcagttaggtg 504
Query: 305 tgttactgggaagatctgtcagcatgacaggtggtcttttttaatttttattgtttcttg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgttactgggaagatctgtcagcatgacaggtggtcttttttaatttttattgtttcttg 564
Query: 365 tccctgcacactgggaatctgacaaccgagaaaactcttgtaacttctt 413
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tccctgcacactgggaatctgacaaccgagaaaactcttgtaacttctt 613
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space: 596804
Effective search space used: 596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no351_d08.g1 MSMg01no351_d08.g1 CHROMAT_FILE:
MSMg01no351_d08.g1 PHD_FILE: MSMg01no351_d08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:24 2005
(548 letters)
>mm_chrX_56633343_56634291
Length = 949
Score = 1000 bits (517), Expect = 0.0
Identities = 541/549 (98%), Gaps = 1/549 (0%)
Strand = Plus / Minus
Query: 1 aggtattttgatttcgcactttgtgtgtctttgtctcatgatgtattaataatttgtgct 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 aggtattttgatttcacactttgtgtgtctttgtctcatgatgtattaataatttgtgct 690
Query: 61 atatttaagtgactgtaatctctctatgcagtcagagagggtgcattcattgaaaatgaa 120
||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 689 atatttaggtgactgtaatctctctatgcagtcagagagggtgcactcactgaaaatgaa 630
Query: 121 gtctgaccttgagatttcatcacacagagatgtaatgtttcaaagaaatgtagaatggta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gtctgaccttgagatttcatcacacagagatgtaatgtttcaaagaaatgtagaatggta 570
Query: 181 gctatttctatctttgctgacattgtttcagagcaagcaggtacacttagtagttaataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 gctatttctatctttgctgacattgtttcagagcaagcaggtacacttagtagttaataa 510
Query: 241 accttaactaaaaacctgtaattgagaatgcttgtctcatattaattccctattactgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 accttaactaaaaacctgtaattgagaatgcttgtctcatattaattccctattactgta 450
Query: 301 aaaagtactttgttagggagttaaagtattttaaccattatcaatttatatcttgtagta 360
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 aaaggtactttgttagggagttaaagtattttaaccattatcaatttatatcttgtagta 390
Query: 361 tatgtttgcaagatttagttgtaagtttcccaaatacatctactgtgtatgttga-tttt 419
|| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 389 taagtttgcaagatttagttgtaagtttcccaaatacatctactgtgtatgttgattttt 330
Query: 420 ttaaatgtcttttctaaagtaccaaaatagcttaatactaaatggttacccaatggccct 479
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ttaaatgtattttctaaagtaccaaaatagcttaatactaaatggttacccaatggccct 270
Query: 480 gaagataaactaccacaagtcaaatattgatttgagtcccctcacaaccaatatcatttt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gaagataaactaccacaagtcaaatattgatttgagtcccctcacaaccaatatcatttt 210
Query: 540 tctttggac 548
|||||||||
Sbjct: 209 tctttggac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 949
Length adjustment: 10
Effective length of query: 538
Effective length of database: 939
Effective search space: 505182
Effective search space used: 505182
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
