GCTXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTACTCCATCAA
TGGCCCCACCCATATCAGAATTCGTTTATCCTGTGAATTAAAGCTTTATG
GAAACACCTTTATCAACATAGACAAATATGTATTTCTATGGTAATTTTAA
AGCCTGTTAAAGTAGAGATGGAAATTAAGCATCATAGCAAGAAACTACAC
TCCAATTCAATCCCGCCCTATACTCATGACTTCAATTGGCCCTGAAGTCA
TCTGATTAAAGATTTAGTATTTTCTTCTTAATATGTAGCCCAAGACAAGT
GTGTTTTCTCTTCTTTCTTGTACTACTTTGCTTAGTGTATATATATATAT
ATATATATATATATATATATATATATATATATATATATATCACCATAAGA
AACTGAGTGGATTAAATACCATAGATATTTTTTGCTCAGAGGTCCATTTA
ATTCTGAAATAAAGGCTGCTTTCTTCTGAAAGNGACCAAAGAAACGCCAC
TTCTATCTTTGTATTGGAAAATGGCGAGAATCTTCTTGTTCTGGTTCCCT
GGGATGCTTCTGCCCCCCAATTTTTTCTAAAAATGAGAAAGCCCTTAATA
TTTTATGCCCCCTTAAGGCCCTTTTTATTTTTTCCCCGGTGAAAATAAGA
CCCAAAGGCCTTGGGGGGGGGAGGAGTGTGAATTCCCCCCTCTTGGCGGT
GAACAAATTAAACCTTTTTAATAATTATATTATAAATTGGACCCCCCCTC
CCACC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXTTTAGAGAGATAAATGTGAAAGCCTCCAGAGGTCCTGTTGAAGTG
GTTGCTCCCCTTGCTTCTGTGGTTTTTCTAATAGTCATGAACAAAGAGAC
AAAAAGGAATTGGATATCTTGATAACAAAGATCAAGATCAGCATTTCCCC
AAGGAACTCTAAATTTAAATAATTAAATTATTAATTATATAATTAAATAA
TTAAATTTGTGTAATTTGAAAATAAAAAAGTGATTTAGAAGCTTAAACAG
TACCAAAGCTCAATAAATTTATCCCTCTTATAATACCTTTATACCATATT
ATAATTTTTATTATTTAAGAGATATATTACAGTGGTAGTAAAGGTGGATA
GCAAAGTAGGCAGGGCATCTAAATAGTACAAGAACTGGTTAGTAGGAATT
TAAAACAAAAGTCCCAAGAATCAGCAAATGACTCACAGAAGTAACTTCTC
TCCTACTACTTTTGAATTTATTTGATGTTTTTCTGAGTTTCCCTTTGAAG
CGGTTCCCTTCTTGGAATACCGGCCACTGATACTACAGCCTCTCGCTTTT
CTGTAGAATCCAATTTTATTTCTGTGTGTCGCCCCACCCTCTCTTATTCC
TCTTTCTTCTATTGACTAATATCCCTCCCCTTGGCGAAAATACTTTTTCA
TAAATCGTTCTTTCTTCCCCTTCCCCCTTTCTCCCCCAATTCACTTTCCC
CTTGTT

Query= MSMg01no359_e21.b1 MSMg01no359_e21.b1 CHROMAT_FILE:
MSMg01no359_e21.b1 PHD_FILE: MSMg01no359_e21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:46 2005
         (427 letters)



>mm_chrX_64546459_64547286
          Length = 828

 Score =  582 bits (301), Expect = e-170
 Identities = 371/425 (87%), Gaps = 48/425 (11%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattctactccatcaatggccccacccatatcagaattcgtttatcctgtgaattaaa 63
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 506 ggaattctactccatcaatggccccacccatatcagaatttgtttatcctgtgaattaaa 447

                                                                       
Query: 64  gctttatggaaacacctttatcaacatagacaaatatgtatttctatggtaattttaaag 123
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gctttatagaaacacctttatcaacatagacaaatatgtatttctatggtaattttaaag 387

                                                                       
Query: 124 cctgttaaagtagagatggaaattaagcatcatagcaagaaactacactccaattcaatc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 cctgttaaagtagagatggaaattaagcatcatagcaagaaactacactccaattcaatc 327

                                                                       
Query: 184 ccgccctatactcatgacttcaattggccctgaagtcatctgattaaagatttagtattt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ccgccctatactcatgacttcaattggccctgaagtcatctgattaaagatttagtattt 267

                                                                       
Query: 244 t-cttcttaatatgtagcccaagacaagtgtgttttctcttctttcttgtactactttgc 302
           | ||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||
Sbjct: 266 tccttcttaatatgtagcccaagacaagtatgtttcctcttctttcttgtattactttgc 207

                                                                       
Query: 303 ttagtgtatatatatatatatatatatatatatatatatatatatatatatatatatatc 362
           |                                               ||||||||||||
Sbjct: 206 t-----------------------------------------------tatatatatatc 194

                                                                       
Query: 363 accataagaaactgagtggattaaataccatagatattttttgctcagaggtccatttaa 422
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 accataagcaactgagtggattaaataccatagatattttttgctcagaggtccatttaa 134

                
Query: 423 ttctg 427
           |||||
Sbjct: 133 ttctg 129


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 828
Length adjustment: 9
Effective length of query: 418
Effective length of database: 819
Effective search space:   342342
Effective search space used:   342342
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)