NCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTTTTTTTACAGTCATTTATATTTTCCTATATATACATATGTAC
ATGTACATAATGTGTGTATGTGTGTGTGTGCATATGTGTATTCTGCTTTC
ATCATGTAGGTCCTTTTAGTATATGTTATGGCATTTGGTTTGGAGATTCT
ATGGGATTTCTGAGTGTGCAAGTAAGTCTCTGCAATTATATCTGTTTCTT
GGGTCTTTTCTTGGGCTCTTTTCCATTTATTTGTTTTGTCCTATTCCTAT
ATGTTAATTTTGTTCTATCTTATTACATTATATTTTATTATCTCTTAGAA
GCTTATTTGTTTTCTGAGAGACACAAAGCCAGTGGATCCTGGGGATATGT
AGAAAGGAACTTGGAAAAGAAGATGGAGGAGAAACCATTATCAGAATATA
ATTTATGAAAAAAATCTAATGTCAAAAAAGGAAAAAATTAANAATACATA
CNAAAATAAAATAATATAAAAGCAATATGTGCATGCACAGTCCTCCTTAG
CTAATGAATCTTCCTGTAGTGTCAACTTTAACCAATTAACTTATTAAATA
TTGGGGCTTTCACACTTGACAAATCCCCCATCTCCCTCAGGTGAATTATA
GTAGCCCAATGATAGAAGGGCACACCCAATTGTTCTTTCAAGTGGTGACT
TTACTTTTAAAGCCCGAAAAAAAAATTGATTTGCTCAAAACCTGGCCAAA
TATAAAAAAA

NCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTATGGATTCAAACCTTGTGTCTCCC
AGTTCAAATAACAATGCAAAACAATTCCAAAGTCTTCAGAGTTACACTGA
TATTGTCCTAGGTCATAATTTTTAGAATCACAAGGAGGAAAATTGATTCT
GAAATAGATGGGTAGGGTATTAAATAGAAATAAGAAAAAATTGAAAGTTT
TGTGAGTTGGCTCTAATGGTATCTCTCAGTAGTGTTAGTCACGGAGTCTT
AAAATCTGAAATACAATGAGTAGCATACTATAAGCTATGTAATAAAAATA
AAAGAAAGTTATCTTTAATAAAATTTTCCTGATGGCTTGAAATAAATTCT
TAAATTGAGTGAAATCAAGTTTTCCTTTAACACATTTTTTAAAAAAGTAA
AAATGACAGGACAAATAGATTTGTATTTATGTGCAACATTTGCTCTTTAT
TTTACTTAACCATAATGCAGTGACAATATATTGCATATAATTTGGGCATA
ACTGAGTANGCAATTTAATTTAAGGTTTTTTCTTTTTTGGTTAAAATTTG
ATTTATTTTTCTAATTATCATTTTCCAGTTAACCTAAAGTTTGGGAAAAA
AAAACATTGTGGGGTTTACATAAAAAAAAAAAGGATTTTAAACCCCGGAG
GGTTTCCCTGGGACTTTTTAAAACCGGGCATCGGGGAAGAAAA

Query= MSMg01no360_f20.g1 MSMg01no360_f20.g1 CHROMAT_FILE:
MSMg01no360_f20.g1 PHD_FILE: MSMg01no360_f20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:05 2005
         (437 letters)



>mm_chrX_143291369_143292205
          Length = 837

 Score =  814 bits (421), Expect = 0.0
 Identities = 433/437 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tatggattcaaaccttgtgtctcccagttcaaataacaatgcaaaacaattccaaagtct 60
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 637 tatggattcaaaccttgtgtctcccagttcaaataacaatgcaaaacacttccaaagtct 578

                                                                       
Query: 61  tcagagttacactgatattgtcctaggtcataatttttagaatcacaaggaggaaaattg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 577 tcagagttacactgatattgtcctaggtcataatttttagaatcacaaggaggaaaaatg 518

                                                                       
Query: 121 attctgaaatagatgggtagggtattaaatagaaataagaaaaaattgaaagttttgtga 180
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 517 attctgaaatagatgggtaggatattaaatagaaataagaaaaaattgaaagttttgtga 458

                                                                       
Query: 181 gttggctctaatggtatctctcagtagtgttagtcacggagtcttaaaatctgaaataca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gttggctctaatggtatctctcagtagtgttagtcacggagtcttaaaatctgaaataca 398

                                                                       
Query: 241 atgagtagcatactataagctatgtaataaaaataaaagaaagttatctttaataaaatt 300
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 atgagtggcatactataagctatgtaataaaaataaaagaaagttatctttaataaaatt 338

                                                                       
Query: 301 ttcctgatggcttgaaataaattcttaaattgagtgaaatcaagttttcctttaacacat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ttcctgatggcttgaaataaattcttaaattgagtgaaatcaagttttcctttaacacat 278

                                                                       
Query: 361 tttttaaaaaagtaaaaatgacaggacaaatagatttgtatttatgtgcaacatttgctc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tttttaaaaaagtaaaaatgacaggacaaatagatttgtatttatgtgcaacatttgctc 218

                            
Query: 421 tttattttacttaacca 437
           |||||||||||||||||
Sbjct: 217 tttattttacttaacca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space:   354384
Effective search space used:   354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)