Query= MSMg01no361_f14.b1 MSMg01no361_f14.b1 CHROMAT_FILE:
MSMg01no361_f14.b1 PHD_FILE: MSMg01no361_f14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:22 2005
(518 letters)
>mm_chrX_34638826_34639745
Length = 920
Score = 955 bits (494), Expect = 0.0
Identities = 510/518 (98%), Gaps = 6/518 (1%)
Strand = Plus / Minus
Query: 5 gaattccagaaagggagaaaataagggatgaaccaaagattaaggtatgaaagtaacaga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 gaattccagaaagggagaaaataagggatgaaccaaagattaaggtatgaaagtaacaga 661
Query: 65 agctgactgcatgtctctgaaaactgcatggatctgtttatgcatgagccttgtgttgtg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 agctgactgcatgtctctgaaaactgcatggatctgtttatgcatgagccttgtgttgtg 601
Query: 125 gcaagttttgttttgtttttgcactttgcgggggc----gggggggggtggaaatagatt 180
||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 600 gcaagttttgttttgtttttgcactttgcgggggccggggggggggggtagaaatagatt 541
Query: 181 tcctgtcatgctaatagcattaagttttaagctttagacttagaaggattcaatacttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tcctgtcatgctaatagcattaagttttaagctttagacttagaaggattcaatacttta 481
Query: 241 cccaatgctgtcatccttcattgcgatcttttttttttttttttttgcctaaatcactag 300
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 480 cccaatgctgtcatccttcattgcgatcttttttttttttttttt--cctaaatcactag 423
Query: 301 taatgtttggtatgtgggtcactagtctctcagttcctgctaaatgaggacttaggtgtg 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 422 taatgtttggtatgtgggtcactagtctctcagttcctgctaaataaggacttaggtgtg 363
Query: 361 gcttgcatgaatttgggggttttgtcagcttttctttcataaatgatacatgaagttgcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gcttgcatgaatttgggggttttgtcagcttttctttcataaatgatacatgaagttgcc 303
Query: 421 tcatctgtttgttttccactgtcttcaggtacacaggtttctgttacaagctgtgaatca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tcatctgtttgttttccactgtcttcaggtacacaggtttctgttacaagctgtgaatca 243
Query: 481 gaaaaatgtaaggatcaagtacatgatacagagcacct 518
||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gaaaaatgtaaggatcaagtacatgatacagagcacct 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 920
Length adjustment: 10
Effective length of query: 508
Effective length of database: 910
Effective search space: 462280
Effective search space used: 462280
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no361_f14.g1 MSMg01no361_f14.g1 CHROMAT_FILE:
MSMg01no361_f14.g1 PHD_FILE: MSMg01no361_f14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:22 2005
(566 letters)
>mm_chrX_34520285_34521250
Length = 966
Score = 1079 bits (558), Expect = 0.0
Identities = 564/566 (99%)
Strand = Plus / Plus
Query: 1 cttaaatggtagacaactgaaaaataaattatgaacatgaatattttagaacagttctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttaaatggtagacaactgaaaaataaattatgaacatgaatattttagaacagttctac 260
Query: 61 cactataatgcagcaggaccatatgtaatgatatgaatacccccaagacatagaataaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cactataatgcagcaggaccatatgtaatgatatgaatacccccaagacatagaataaaa 320
Query: 121 cagaaaacagaaatcgtagaaagacatgcataattagtacatgtatgtacaaaatgcctg 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagaaaacagaaattgtagaaagacatgcataattagtacatgtatgtacaaaatgcctg 380
Query: 181 gtatatatgcacatgcacataaatctatgccaatacctaggacagatgcatgaaaagaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtatatatgcacatgcacataaatctatgccaatacctaggacagatgcatgaaaagaca 440
Query: 241 ccaaaccaaaagacaccggcagttacgtcagagaacaggaaatggaaacagaggcctaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccaaaccaaaagacaccggcagttacgtcagagaacaggaaatggaaacagaggcctaat 500
Query: 301 tagaggtgtcatcgggttttgtagtgttcaattcttttatgacacagaagaactaactca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagaggtgtcatcgggttttgtagtgttcaattcttttatgacacagaagaactaactca 560
Query: 361 cattgttaccggtataattgacagatatatatattttaataagataaggaaagttcttgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cattgttaccggtataattgacagatatatatattttaataagataaggaaagttcttgc 620
Query: 421 tcattcagcttggcagcccaggtgattagttaggttgtagcccaagagtggctaaaggaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcattcagcttggcagcccaggtgattagttaggttgtagcccaagagtggctaaaggaa 680
Query: 481 ggcaaaatgaaaggtgctcttgggaactgagagagccccccacttccctccgcccaactc 540
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 681 ggcaaaatgaaaggtgctcttgggaaccgagagagccccccacttccctccgcccaactc 740
Query: 541 catttcctgtttgcttgtcatctgca 566
||||||||||||||||||||||||||
Sbjct: 741 catttcctgtttgcttgtcatctgca 766
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 966
Length adjustment: 10
Effective length of query: 556
Effective length of database: 956
Effective search space: 531536
Effective search space used: 531536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
