NTTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTTCACTCTATTATACATTATAATCTTATGAATTAATGTACTCAT
ATAGTGAAATAAAGCTTAAAGAGAATTTGCCTAGCATGGATGAAGTCCTG
ATAAAGTTTTGATTGTCATGTCTAGTATTGAAATTTCATAGTGAAAATAC
ATGCAGCATAGTTCTTATGAACATATTTACTAGAATAGCCTTACTTCTGT
GCAGCAGAAAATTCATCCAGGCTTAAAGTTTTCTTAGAGGTTGCTGATGC
AAAGGGGAACAGAGCTAGTAGAGGAGGATTTAATTAGATAATGCTGGGGT
TTGTTTTCTTCTGCCACTGTCATTCAAGTTTCAAGTTAATTGTTATGTTG
TTAGAGAGAAGTTCACTGACACTTAACGGAGTTCAAAGATCATCTCATTT
AATTCTCTGTGGAGTGCCTATTAACCTCTAATACCTTATGACTGGTACAT
CCCTGCTTAATTGTTTCTTAGGCTCCCTCAACGTCAAATCAAGAAGGCAA
TAGACTCACTGTGATTTATTACTGTGTCCTCAATGTCTAGAATGGTTACA
GGCACATTGCACAATAACTTAGTAAATGTTTTGCTTCATTAATGAATGAA
TATATGGTCAGTAAATTAAAAGAACTTTAGAAAATCACATAGTAATTTAG
ATAACTTTAAAAAATGAAAGTAACCCACCAAATGAATTGTACCTGCTTTG
ATTT

NCGATTGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGC
AGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGC
AAATCAAAACAACCCTAAGATTCCACCTCACACCAGTCAGAATGTCTAAG
ATCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGG
AACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGA
AATCCGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGAT
CCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAA
GAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCA
GAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAA
ATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGA
ATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGA
GTGAGGTAACTCATTCACAAAGGACTCACACCATATGTACTCACTGATAA
GTGGATATTAGCCCAAAACCCAAGGAAACCCAGATATAAGTTACAATTTC
CTAAACCCTGGAACTCTTGAAAAATGAAGACTGAAGAGGTGGGACCTATG
CCCCTCCTTAAAAAGGGGAACAAA

Query= MSMg01no361_h14.b1 MSMg01no361_h14.b1 CHROMAT_FILE:
MSMg01no361_h14.b1 PHD_FILE: MSMg01no361_h14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:32 2005
         (647 letters)



>mm_chrX_84442512_84443558
          Length = 1047

 Score = 1228 bits (635), Expect = 0.0
 Identities = 644/647 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttatgaattaatgtactcatatagtgaaataaagcttaaagagaatttgcctagcatgg 60
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cttatgaattaatgtattcatatagtgaaataaagcttaaagagaatttgcctagcatgg 626

                                                                       
Query: 61  atgaagtcctgataaagttttgattgtcatgtctagtattgaaatttcatagtgaaaata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atgaagtcctgataaagttttgattgtcatgtctagtattgaaatttcatagtgaaaata 566

                                                                       
Query: 121 catgcagcatagttcttatgaacatatttactagaatagccttacttctgtgcagcagaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 catgcagcatagttcttatgaacatatttactagaatagccttacttctgtgcagcagaa 506

                                                                       
Query: 181 aattcatccaggcttaaagttttcttagaggttgctgatgcaaaggggaacagagctagt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aattcatccaggcttaaagttttcttagaggttgctgatgcaaaggggaacagagctagt 446

                                                                       
Query: 241 agaggaggatttaattagataatgctggggtttgttttcttctgccactgtcattcaagt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agaggaggatttaattagataatgctggggtttgttttcttctgccactgtcattcaagt 386

                                                                       
Query: 301 ttcaagttaattgttatgttgttagagagaagttcactgacacttaacggagttcaaaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttcaagttaattgttatgttgttagagagaagttcactgacacttaacggagttcaaaga 326

                                                                       
Query: 361 tcatctcatttaattctctgtggagtgcctattaacctctaataccttatgactggtaca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcatctcatttaattctctgtggagtgcctattaacctctaataccttatgactggtaca 266

                                                                       
Query: 421 tccctgcttaattgtttcttaggctccctcaacgtcaaatcaagaaggcaatagactcac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tccctgcttaattgtttcttaggctccctcaacgtcaaatcaagaaggcaatagactcac 206

                                                                       
Query: 481 tgtgatttattactgtgtcctcaatgtctagaatggttacaggcacattgcacaataact 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tgtgatttattactgtgtcctcaatgtctagaatggttacaggcacattgcacaataact 146

                                                                       
Query: 541 tagtaaatgttttgcttcattaatgaatgaatatatggtcagtaaattaaaagaacttta 600
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 tagtaaatattttgcttcattaatgaatgaatatatggtcagtaaattaaaagaacttta 86

                                                          
Query: 601 gaaaatcacatagtaatttagataactttaaaaaatgaaagtaaccc 647
           |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 85  gaaaatcaaatagtaatttagataactttaaaaaatgaaagtaaccc 39


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space:   660569
Effective search space used:   660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)