XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCTGTTTA
CTTCTATTCCCCAGTTTTGATTGGGTTGTTTGGATTTTTGGAGGTTAGTT
TCTTGATTTCTTTATATATTTTGGATACTATCCCTGTGTCTAATGTGGGG
TTAGTAAAGATTTTTTTTCCCATTCTGAAGGTTGCTGATTTGTCCTTTTA
ACTATGTCCTTTGCTTTACAGAAGCTTTTCAGTTTTCAATTTTTGATCTT
TTTTTCTTTTTTTTAATATTTATTTACATTTCAAATATTGTCCAGCTCCT
GGTCTTCCCTCTACAAAACCCCCACCCATCTCTCCTCACCTGAGCCCCAC
TCACCCCTGCCTCACCCATCTAGAATTCCCATATGCTGTTCCTGAATTTC
CTTTAGACAGGAACAATCCTGGGTTAAAATTAATGAGATGTGTAGGTGGC
CCCATCCCTGGGGGCTATGCCTATCTACTGGAGGTGATCTCTACACCTCC
CCTTTGTTGTGTACTTCAGCTAATGTCATCACCTTTGGGACCTGGGAGCC
TCTTTCTTCTCTGACATCTGGGACTTTCTAATGACTCTCTGTTCCCATTC
CCCACCCACTGAGCATTGCATGAGTCTTTAAAGCTCCATACGTTCCACTT
ATCTTCATCTTTGTAACCACCCTTGAAATCTGATGTCAAGGGTCTCCACC
TCCTAAAAACCATATCTGATACTCTTTCCTTCAAATACATTGGAACATTC
CTTTG

NTTTTTTCGATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATGCAGA
ATGGCTGAGAAGAACCTGAAAAAAATGTTTAGCATCCTTAATCATCAGGG
AAATGCAAATCAAAACAACCCTGCAATTCCGTGTCACACCAGTCAGAATG
GATAAGATCAAAAATTCAGGTTACAGCAGATGCTGGCAAGGATATGGAGA
AAGAGGAACACTCCTCCATTGTTGGTGGTATTGCAAGTTTAAACAGGTCA
AGATAAGAGGATGAGGCTCTAGCTTGTTATCAGAACTCAGCACACTTTCC
TATTTCAGAAGTAAAATTTTATCTCACTCTACTCCTACATAATGCTATAG
TTTCTAGGCAAAGAGTGTTATTAGGCTATGATAATACAAAATAGGGATTT
GAATTTCTCAGGAGCACAAAGGCACATATAAAAGCAACATATATAGATAC
ACATGCATACAATTACATATTCCTTCTTTTCCTCTAGGCTAGTAAAACCT
TCTTGCTCCGTGATAATCTCTGTTGACAACAACCTGTACCCCTGAAGATA
GTTATTACACAATTGAATGATCATTCTAATCGAAACTCAAGAATTGGCAT
GGGTAAAATAAACCTTGGGTGGGCCCAAGGCTTCCTTTCCCATCCTTCCC
CTGTCCAGGGGATTTAATCCCAAAATGGCCCTTTCTCAGAGGTAATTTTA
TAAAG

Query= MSMg01no363_h19.g1 MSMg01no363_h19.g1 CHROMAT_FILE:
MSMg01no363_h19.g1 PHD_FILE: MSMg01no363_h19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:13 2005
         (456 letters)



>mm_chrX_64859963_64860815
          Length = 853

 Score =  830 bits (429), Expect = 0.0
 Identities = 449/457 (98%), Gaps = 4/457 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcacctgaggaatgcagaatggctgagaagaacctgaaaaaaa-tgtttagcatccttaa 59
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 200 tcacctgaggaatgcagaatggctgagaagaacctgaaaaaaaatgtttagcatccttaa 259

                                                                       
Query: 60  tcatcagggaaatgcaaatcaaaacaaccctgcaattccgtgtcacaccagtcagaatgg 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tcatcagggaaatgcaaatcaaaacaaccctgcaattccgtgtcacaccagtcagaatgg 319

                                                                       
Query: 120 ataagatcaaaaattcaggttacagcagatgctggcaaggatatggagaaagaggaacac 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ataagatcaaaaattcaggttacagcagatgctggcaaggatatggagaaagaggaacac 379

                                                                       
Query: 180 tcctccattgttggtggtattgcaagtttaaacaggtcaagataagaggatgaggctcta 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tcctccattgttggtggtattgcaagtttaaacaggtcaagataagaggatgaggctcta 439

                                                                       
Query: 240 gcttgttatcagaactcagcacactttcctatttcagaagtaaaattttatctcactcta 299
           ||  | || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gcaagctagcagaactcagcacactttcctatttcagaagtaaaattttatctcactcta 499

                                                                       
Query: 300 ctcctacataatgctatagtttctaggcaaagagtgttattaggctatgataatacaaaa 359
           |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||
Sbjct: 500 ctcctacataatgctatagtttctaggcaaagagtgtta---ggctatgataatacaaaa 556

                                                                       
Query: 360 tagggatttgaatttctcaggagcacaaaggcacatataaaagcaacatatatagataca 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tagggatttgaatttctcaggagcacaaaggcacatataaaagcaacatatatagataca 616

                                                
Query: 420 catgcatacaattacatattccttcttttcctctagg 456
           |||||||||||||||||||||||||||||||||||||
Sbjct: 617 catgcatacaattacatattccttcttttcctctagg 653


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 853
Length adjustment: 10
Effective length of query: 446
Effective length of database: 843
Effective search space:   375978
Effective search space used:   375978
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)