Query= MSMg01no367_n03.b1 MSMg01no367_n03.b1 CHROMAT_FILE:
MSMg01no367_n03.b1 PHD_FILE: MSMg01no367_n03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:05 2005
(537 letters)
>mm_chrX_95347152_95348088
Length = 937
Score = 1023 bits (529), Expect = 0.0
Identities = 532/533 (99%)
Strand = Plus / Plus
Query: 5 gaattcaacaaggtacatttagagcaggtagatggggttactttagtggtaaacgccggg 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaacaaggcacatttagagcaggtagatggggttactttagtggtaaacgccggg 264
Query: 65 caaagtttactctcactatttctcagcatgggctgactgtttgtgtgggccagttttctc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caaagtttactctcactatttctcagcatgggctgactgtttgtgtgggccagttttctc 324
Query: 125 ttgaaaagtctttactttctgtagattagaatacatcagaaagtctccgtttggggcttg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttgaaaagtctttactttctgtagattagaatacatcagaaagtctccgtttggggcttg 384
Query: 185 caccagacctgtaaagaaaagaaatgtactgtaaatgatagtttgagcaggtttaagttt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caccagacctgtaaagaaaagaaatgtactgtaaatgatagtttgagcaggtttaagttt 444
Query: 245 gactcacaagtgttacaaacagaacagaacagaactgggaggcattgtcctgctgcttga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gactcacaagtgttacaaacagaacagaacagaactgggaggcattgtcctgctgcttga 504
Query: 305 gtgtgctcacacatttatactggggacggaggaatagggcgccacattatattttgttca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtgtgctcacacatttatactggggacggaggaatagggcgccacattatattttgttca 564
Query: 365 ttttaaggacatacttatagtttaaaacttgagttgctcgtgttaacaaattgagtaaga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttttaaggacatacttatagtttaaaacttgagttgctcgtgttaacaaattgagtaaga 624
Query: 425 actgtcaatgacctatgaaccacaatgttgcctcacagttctaattaggacaggagaaaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 actgtcaatgacctatgaaccacaatgttgcctcacagttctaattaggacaggagaaaa 684
Query: 485 gtggcgggcaattttgccttattaaacgtatttaccactgcttcttgagcctc 537
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gtggcgggcaattttgccttattaaacgtatttaccactgcttcttgagcctc 737
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 937
Length adjustment: 10
Effective length of query: 527
Effective length of database: 927
Effective search space: 488529
Effective search space used: 488529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no367_n03.g1 MSMg01no367_n03.g1 CHROMAT_FILE:
MSMg01no367_n03.g1 PHD_FILE: MSMg01no367_n03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:05 2005
(493 letters)
>mm_chrX_95541344_95542235
Length = 892
Score = 938 bits (485), Expect = 0.0
Identities = 491/493 (99%), Gaps = 1/493 (0%)
Strand = Plus / Minus
Query: 1 cttccaatatagtcataaatattgacatcaaggatcagatctggaggactataagagatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 cttccaatatagtcataaatattgacatcaaggatcagatctggaggactataagagatc 633
Query: 61 ctttaaaagatggttttcatatccattcttatgacagggagtaggggtaaaagaaaaggg 120
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 c-gtaaaagatggttttcatatccattcttatgacagggagtaggggtaaaagaaaaggg 574
Query: 121 agagatggacagtgtaataatgatctgagacaaaaatctcagctgtttcaggaaaggaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 agagatggacagtgtaataatgatctgagacaaaaatctcagctgtttcaggaaaggaca 514
Query: 181 gatttaacttgatgaaggtcaagggcactttccacttcagtattgaaggtgatgagaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gatttaacttgatgaaggtcaagggcactttccacttcagtattgaaggtgatgagaatg 454
Query: 241 gagagctatgatagatgaaaaaaatttttatatcagccattttctctctgttcttctggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 gagagctatgatagatgaaaaaaatttttatatcagccattttctctctgttcttctggg 394
Query: 301 aatagctttaaccctagtaaccatcctttactctgacatccacactatctttacttttat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 aatagctttaaccctagtaaccatcctttactctgacatccacactatctttacttttat 334
Query: 361 aaaattcactggccctctgtccttttcatttattaggggaagctgtcaccccacccccgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 aaaattcactggccctctgtccttttcatttattaggggaagctgtcaccccacccccgc 274
Query: 421 agcaatcttaaaattgaagctttatttttgagtatttgtatatgtattttgggggatgcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 agcaatcttaaaattgaagctttatttttgagtatttgtatatgtattttgggggatgcg 214
Query: 481 tatatacacatga 493
|||||||||||||
Sbjct: 213 tatatacacatga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 892
Length adjustment: 10
Effective length of query: 483
Effective length of database: 882
Effective search space: 426006
Effective search space used: 426006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
